RNA–Protein interactions for RNA: ENST00000421664.1

EFEMP1-203, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-203ENST00000421664 TINF2Q9BSI4 451 aa19■□□□□ 0.63
EFEMP1-203ENST00000421664 LRRC37A2A6NM11 1700 aa19■□□□□ 0.63
EFEMP1-203ENST00000421664 SYNGAP1Q96PV0 1343 aa19■□□□□ 0.63
EFEMP1-203ENST00000421664 CYBAP13498 195 aa18.99■□□□□ 0.63
EFEMP1-203ENST00000421664 CCL5P13501 91 aa18.99■□□□□ 0.63
EFEMP1-203ENST00000421664 HSD17B4P51659 736 aa18.99■□□□□ 0.63
EFEMP1-203ENST00000421664 STK3Q13188 491 aa18.99■□□□□ 0.63
EFEMP1-203ENST00000421664 TBC1D5Q92609 795 aa18.99■□□□□ 0.63
EFEMP1-203ENST00000421664 PURBQ96QR8 312 aaKnown RBP18.99■□□□□ 0.63
EFEMP1-203ENST00000421664 UNC93B1Q9H1C4 597 aa18.99■□□□□ 0.63
EFEMP1-203ENST00000421664 V9GY48 417 aaPredicted RBP18.99■□□□□ 0.63
EFEMP1-203ENST00000421664 PRPF3O43395 683 aaKnown RBP18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 LARGE1O95461 756 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 CALML3P27482 149 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 SCRN1Q12765 414 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 ME3Q16798 604 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 WWC2Q6AWC2 1192 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 SAMD3Q8N6K7 520 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 IL27Q8NEV9 243 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 SYTL5Q8TDW5 730 aaPredicted RBP18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 GPKOWQ92917 476 aaPredicted RBP eCLIP18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 PHKBQ93100 1093 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 RNF26Q9BY78 433 aaPredicted RBP18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 SLKQ9H2G2 1235 aaPredicted RBP18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 PAK6Q9NQU5 681 aaPredicted RBP18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 MAP3K20Q9NYL2 800 aaKnown RBP18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 COL20A1Q9P218 1284 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 RBM27Q9P2N5 1060 aaKnown RBP18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 RPTORQ8N122 1335 aa18.98■□□□□ 0.63
EFEMP1-203ENST00000421664 LOC102724159A0A0B4J2E5 919 aa18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 hCG_1984214I3L0E3 225 aa18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 MYCP01106 439 aaPredicted RBP18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 PWP2Q15269 919 aaKnown RBP18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 PKN1Q16512 942 aa18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 PFKFB3Q16875 520 aaPredicted RBP18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 PPP1R18Q6NYC8 613 aa18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 NOL8Q76FK4 1167 aaKnown RBP18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 HEATR3Q7Z4Q2 680 aa18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 ZNF713Q8N859 430 aaPredicted RBP18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 TRPV1Q8NER1 839 aa18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 MORC4Q8TE76 937 aa18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 HMX1Q9NP08 348 aaPredicted RBP18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 ADD3Q9UEY8 706 aaKnown RBP18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 NRBP1Q9UHY1 535 aa18.97■□□□□ 0.63
EFEMP1-203ENST00000421664 CPLX1O14810 134 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 SNAI1O95863 264 aaPredicted RBP18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 CFBP00751 764 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 SCG2P13521 617 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 ALDH5A1P51649 535 aaPredicted RBP18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 TYW1BQ6NUM6 668 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 ARMCX2Q7L311 632 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 DNERQ8NFT8 737 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 GTF3C6Q969F1 213 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 RNF208Q9H0X6 261 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 BARHL2Q9NY43 387 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 LIMCH1Q9UPQ0 1083 aa18.96■□□□□ 0.63
EFEMP1-203ENST00000421664 ASB14A6NK59 587 aa18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 CCDC85CA6NKD9 419 aa18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 GCOM1H8Y6P7 765 aaPredicted RBP18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 STXBP3O00186 592 aa18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 POLR2MP0CAP2 368 aa18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 EDNRBP24530 442 aa18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 CCND3P30281 292 aaPredicted RBP18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 CPLX2Q6PUV4 134 aaKnown RBP18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 SLC26A6Q9BXS9 759 aa18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 KATNBL1Q9H079 304 aa18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 MCM3APO60318 1980 aa18.95■□□□□ 0.62
EFEMP1-203ENST00000421664 PIK3CDO00329 1044 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 PPFIA3O75145 1194 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 CDKL5O76039 1030 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 GJB1P08034 283 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 HOXA13P31271 388 aaPredicted RBP18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 ST3GAL1Q11201 340 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 PRAMEF19Q5SWL8 479 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 NECAB1Q8N987 351 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 TAAR1Q96RJ0 339 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 TMEM106CQ9BVX2 250 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 CNPY2Q9Y2B0 182 aa18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 DDX49Q9Y6V7 483 aaKnown RBP18.94■□□□□ 0.62
EFEMP1-203ENST00000421664 MEIS2O14770 477 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 ST18O60284 1047 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 CTDNEP1O95476 244 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 ZNF865P0CJ78 1059 aaPredicted RBP18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 NAPAP54920 295 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 AKAP17AQ02040 695 aaKnown RBP18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 TEX2Q8IWB9 1127 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 TRIM22Q8IYM9 498 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 ABHD16BQ9H3Z7 469 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 PSTPIP2Q9H939 334 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 STK36Q9NRP7 1315 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 FRMPD3Q5JV73 1810 aa18.93■□□□□ 0.62
EFEMP1-203ENST00000421664 POTEFA5A3E0 1075 aa18.92■□□□□ 0.62
EFEMP1-203ENST00000421664 SEPT4O43236 478 aa18.92■□□□□ 0.62
EFEMP1-203ENST00000421664 DEXIO95424 95 aa18.92■□□□□ 0.62
EFEMP1-203ENST00000421664 SSRP1Q08945 709 aaKnown RBP18.92■□□□□ 0.62
EFEMP1-203ENST00000421664 NSUN6Q8TEA1 469 aaKnown RBP18.92■□□□□ 0.62
EFEMP1-203ENST00000421664 DEFB118Q96PH6 123 aa18.92■□□□□ 0.62
EFEMP1-203ENST00000421664 RMDN3Q96TC7 470 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms