RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 RPS6P62753 249 aaKnown RBP16.7■□□□□ 0.26
PTPN18-204ENST00000420717 CNTN2Q02246 1040 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 BAATQ14032 418 aaPredicted RBP16.7■□□□□ 0.26
PTPN18-204ENST00000420717 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 NTRK3Q16288 839 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 NSMFQ6X4W1 530 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 HOMER1Q86YM7 354 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 RAB11FIP4Q86YS3 637 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 TRPV1Q8NER1 839 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 DNERQ8NFT8 737 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 SHISA4Q96DD7 197 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 KATNBL1Q9H079 304 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
PTPN18-204ENST00000420717 ADD3Q9UEY8 706 aaKnown RBP16.7■□□□□ 0.26
PTPN18-204ENST00000420717 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
PTPN18-204ENST00000420717 ASB14A6NK59 587 aa16.69■□□□□ 0.26
PTPN18-204ENST00000420717 MSCO60682 206 aa16.69■□□□□ 0.26
PTPN18-204ENST00000420717 EDNRBP24530 442 aa16.69■□□□□ 0.26
PTPN18-204ENST00000420717 PPP1R18Q6NYC8 613 aa16.69■□□□□ 0.26
PTPN18-204ENST00000420717 TMEM106CQ9BVX2 250 aa16.69■□□□□ 0.26
PTPN18-204ENST00000420717 C22orf23Q9BZE7 217 aa16.69■□□□□ 0.26
PTPN18-204ENST00000420717 RNF208Q9H0X6 261 aa16.69■□□□□ 0.26
PTPN18-204ENST00000420717 FRMPD4Q14CM0 1322 aa16.69■□□□□ 0.26
PTPN18-204ENST00000420717 PIK3CDO00329 1044 aa16.68■□□□□ 0.26
PTPN18-204ENST00000420717 SEPT4O43236 478 aa16.68■□□□□ 0.26
PTPN18-204ENST00000420717 SNAI1O95863 264 aaPredicted RBP16.68■□□□□ 0.26
PTPN18-204ENST00000420717 ZNF865P0CJ78 1059 aaPredicted RBP16.68■□□□□ 0.26
PTPN18-204ENST00000420717 IFNAR1P17181 557 aa16.68■□□□□ 0.26
PTPN18-204ENST00000420717 ALDH5A1P51649 535 aaPredicted RBP16.68■□□□□ 0.26
PTPN18-204ENST00000420717 ARMCX2Q7L311 632 aa16.68■□□□□ 0.26
PTPN18-204ENST00000420717 CMTR1Q8N1G2 835 aaKnown RBP16.68■□□□□ 0.26
PTPN18-204ENST00000420717 SYTL5Q8TDW5 730 aaPredicted RBP16.68■□□□□ 0.26
PTPN18-204ENST00000420717 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
PTPN18-204ENST00000420717 PTPDC1A2A3K4 754 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 SGPL1O95470 568 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 CCND3P30281 292 aaPredicted RBP16.67■□□□□ 0.26
PTPN18-204ENST00000420717 ADD1P35611 737 aaKnown RBP16.67■□□□□ 0.26
PTPN18-204ENST00000420717 AK2P54819 239 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 LHX8Q68G74 356 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 UBE2Q1Q7Z7E8 422 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 TBC1D32Q96NH3 1257 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 RNF26Q9BY78 433 aaPredicted RBP16.67■□□□□ 0.26
PTPN18-204ENST00000420717 BACH2Q9BYV9 841 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 ABHD16BQ9H3Z7 469 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.67■□□□□ 0.26
PTPN18-204ENST00000420717 COL20A1Q9P218 1284 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 OGDHLQ9ULD0 1010 aa16.67■□□□□ 0.26
PTPN18-204ENST00000420717 PRPF3O43395 683 aaKnown RBP16.66■□□□□ 0.26
PTPN18-204ENST00000420717 PFKFB2O60825 505 aa16.66■□□□□ 0.26
PTPN18-204ENST00000420717 SOX10P56693 466 aa16.66■□□□□ 0.26
PTPN18-204ENST00000420717 ANKLE1Q8NAG6 615 aa16.66■□□□□ 0.26
PTPN18-204ENST00000420717 UPF2Q9HAU5 1272 aaKnown RBP16.66■□□□□ 0.26
PTPN18-204ENST00000420717 DDX20Q9UHI6 824 aaKnown RBP16.66■□□□□ 0.26
PTPN18-204ENST00000420717 TPCN1Q9ULQ1 816 aa16.66■□□□□ 0.26
PTPN18-204ENST00000420717 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
PTPN18-204ENST00000420717 KIAA1217Q5T5P2 1943 aa16.65■□□□□ 0.26
PTPN18-204ENST00000420717 CALML3P27482 149 aa16.65■□□□□ 0.26
PTPN18-204ENST00000420717 NEK4P51957 841 aa16.65■□□□□ 0.26
PTPN18-204ENST00000420717 PFKFB3Q16875 520 aaPredicted RBP16.65■□□□□ 0.26
PTPN18-204ENST00000420717 WWC2Q6AWC2 1192 aa16.65■□□□□ 0.26
PTPN18-204ENST00000420717 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
PTPN18-204ENST00000420717 TBC1D5Q92609 795 aa16.65■□□□□ 0.26
PTPN18-204ENST00000420717 DEFB118Q96PH6 123 aa16.65■□□□□ 0.26
PTPN18-204ENST00000420717 VTA1Q9NP79 307 aa16.65■□□□□ 0.26
PTPN18-204ENST00000420717 BARHL2Q9NY43 387 aa16.65■□□□□ 0.26
PTPN18-204ENST00000420717 ESYT2A0FGR8 921 aa16.64■□□□□ 0.25
PTPN18-204ENST00000420717 GCOM1H8Y6P7 765 aaPredicted RBP16.64■□□□□ 0.25
PTPN18-204ENST00000420717 STXBP3O00186 592 aa16.64■□□□□ 0.25
PTPN18-204ENST00000420717 POLR2MP0CAP2 368 aa16.64■□□□□ 0.25
PTPN18-204ENST00000420717 AKR1A1P14550 325 aa16.64■□□□□ 0.25
PTPN18-204ENST00000420717 ACVR2BQ13705 512 aa16.64■□□□□ 0.25
PTPN18-204ENST00000420717 PKN1Q16512 942 aa16.64■□□□□ 0.25
PTPN18-204ENST00000420717 NSUN6Q8TEA1 469 aaKnown RBP16.64■□□□□ 0.25
PTPN18-204ENST00000420717 PURBQ96QR8 312 aaKnown RBP16.64■□□□□ 0.25
PTPN18-204ENST00000420717 IWS1Q96ST2 819 aa16.64■□□□□ 0.25
PTPN18-204ENST00000420717 MPHOSPH6Q99547 160 aaKnown RBP16.64■□□□□ 0.25
PTPN18-204ENST00000420717 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.25
PTPN18-204ENST00000420717 STK36Q9NRP7 1315 aa16.64■□□□□ 0.25
PTPN18-204ENST00000420717 RBM47A0AV96 593 aaKnown RBP16.63■□□□□ 0.25
PTPN18-204ENST00000420717 B4DLN1 442 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 MEIS2O14770 477 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 CFBP00751 764 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 SCG2P13521 617 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 MRPL12P52815 198 aaKnown RBP16.63■□□□□ 0.25
PTPN18-204ENST00000420717 NKX3-2P78367 333 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 SCRN1Q12765 414 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 RABEP1Q15276 862 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 TYW1BQ6NUM6 668 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 PXMP2Q9NR77 195 aa16.63■□□□□ 0.25
PTPN18-204ENST00000420717 NAP1L2Q9ULW6 460 aaPredicted RBP16.63■□□□□ 0.25
PTPN18-204ENST00000420717 V9GY48 417 aaPredicted RBP16.63■□□□□ 0.25
PTPN18-204ENST00000420717 CDKL5O76039 1030 aa16.62■□□□□ 0.25
PTPN18-204ENST00000420717 MYCP01106 439 aaPredicted RBP16.62■□□□□ 0.25
PTPN18-204ENST00000420717 EN2P19622 333 aaPredicted RBP16.62■□□□□ 0.25
PTPN18-204ENST00000420717 MNX1P50219 401 aaPredicted RBP16.62■□□□□ 0.25
PTPN18-204ENST00000420717 CCT2P78371 535 aaKnown RBP16.62■□□□□ 0.25
PTPN18-204ENST00000420717 PRAMEF19Q5SWL8 479 aa16.62■□□□□ 0.25
PTPN18-204ENST00000420717 HEATR3Q7Z4Q2 680 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms