RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 RBM47A0AV96 593 aaKnown RBP16.89■□□□□ 0.29
NFE4-201ENST00000420058 EPOPA6NHQ4 379 aa16.89■□□□□ 0.29
NFE4-201ENST00000420058 ZEB2O60315 1214 aa16.89■□□□□ 0.29
NFE4-201ENST00000420058 ARHGEF15O94989 841 aa16.89■□□□□ 0.29
NFE4-201ENST00000420058 POU3F3P20264 500 aaPredicted RBP16.89■□□□□ 0.29
NFE4-201ENST00000420058 TFF2Q03403 129 aa16.89■□□□□ 0.29
NFE4-201ENST00000420058 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
NFE4-201ENST00000420058 OTUD7AQ8TE49 926 aaPredicted RBP16.89■□□□□ 0.29
NFE4-201ENST00000420058 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
NFE4-201ENST00000420058 LRRC37A2A6NM11 1700 aa16.89■□□□□ 0.29
NFE4-201ENST00000420058 ICAM1P05362 532 aa16.88■□□□□ 0.29
NFE4-201ENST00000420058 ATP2A2P16615 1042 aaKnown RBP16.88■□□□□ 0.29
NFE4-201ENST00000420058 PURAQ00577 322 aaKnown RBP16.88■□□□□ 0.29
NFE4-201ENST00000420058 CTDSPL2Q05D32 466 aa16.88■□□□□ 0.29
NFE4-201ENST00000420058 IKQ13123 557 aaPredicted RBP16.88■□□□□ 0.29
NFE4-201ENST00000420058 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
NFE4-201ENST00000420058 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
NFE4-201ENST00000420058 NACAP1Q9BZK3 213 aa16.88■□□□□ 0.29
NFE4-201ENST00000420058 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
NFE4-201ENST00000420058 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
NFE4-201ENST00000420058 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
NFE4-201ENST00000420058 MTCH2Q9Y6C9 303 aa16.88■□□□□ 0.29
NFE4-201ENST00000420058 BRWD1Q9NSI6 2320 aa16.88■□□□□ 0.29
NFE4-201ENST00000420058 NFIBO00712 420 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 FGRP09769 529 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 PPP2R2DQ66LE6 453 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 BTNL9Q6UXG8 535 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 PPP1R13LQ8WUF5 828 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 WDR11Q9BZH6 1224 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 NAPBQ9H115 298 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 CCPG1Q9ULG6 757 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 TNKSO95271 1327 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 TET1Q8NFU7 2136 aa16.87■□□□□ 0.29
NFE4-201ENST00000420058 SLC16A2P36021 539 aa16.86■□□□□ 0.29
NFE4-201ENST00000420058 ALDH5A1P51649 535 aaPredicted RBP16.86■□□□□ 0.29
NFE4-201ENST00000420058 KCNQ1P51787 676 aa16.86■□□□□ 0.29
NFE4-201ENST00000420058 KRT40Q6A162 431 aa16.86■□□□□ 0.29
NFE4-201ENST00000420058 DEFB128Q7Z7B8 93 aa16.86■□□□□ 0.29
NFE4-201ENST00000420058 CLEC4DQ8WXI8 215 aa16.86■□□□□ 0.29
NFE4-201ENST00000420058 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
NFE4-201ENST00000420058 ANAPC4Q9UJX5 808 aa16.86■□□□□ 0.29
NFE4-201ENST00000420058 TSPY2A6NKD2 308 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 ZBBXA8MT70 800 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 ERC2O15083 957 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 CA3P07451 260 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 SLC3A2P08195 630 aaKnown RBP16.85■□□□□ 0.29
NFE4-201ENST00000420058 NBPF20Q3BBV1 942 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 TMEM67Q5HYA8 995 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 VPS53Q5VIR6 699 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 CERS4Q9HA82 394 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 SCN10AQ9Y5Y9 1956 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 SCN5AQ14524 2016 aa16.85■□□□□ 0.29
NFE4-201ENST00000420058 RBAK-RBAKDNI3L0D1 243 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 PFKMP08237 780 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 SUPT20HL2P0C7V6 817 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 GPNMBQ14956 572 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 SPRED2Q7Z698 418 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 MICALL1Q8N3F8 863 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 DCAF4Q8WV16 495 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 COPS5Q92905 334 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 POLR3EQ9NVU0 708 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 MTMR7Q9Y216 660 aa16.84■□□□□ 0.29
NFE4-201ENST00000420058 LOC102724159A0A0B4J2E5 919 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 A6NJR5 290 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 ORC4O43929 436 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 MYL3P08590 195 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 IQCF3P0C7M6 154 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 EDNRBP24530 442 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 TAP1Q03518 808 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 PWP2Q15269 919 aaKnown RBP16.83■□□□□ 0.28
NFE4-201ENST00000420058 LRRFIP1Q32MZ4 808 aaKnown RBP16.83■□□□□ 0.28
NFE4-201ENST00000420058 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 SYDE2Q5VT97 1194 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 SLC30A10Q6XR72 485 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 PIEZO1Q92508 2521 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 CTAGE1Q96RT6 745 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 MTG1Q9BT17 334 aaPredicted RBP16.83■□□□□ 0.28
NFE4-201ENST00000420058 FSD1Q9BTV5 496 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
NFE4-201ENST00000420058 SALL3Q9BXA9 1300 aa16.82■□□□□ 0.28
NFE4-201ENST00000420058 TLL1O43897 1013 aa16.82■□□□□ 0.28
NFE4-201ENST00000420058 RANBP6O60518 1105 aaKnown RBP16.82■□□□□ 0.28
NFE4-201ENST00000420058 LPXNO60711 386 aa16.82■□□□□ 0.28
NFE4-201ENST00000420058 ALX1Q15699 326 aa16.82■□□□□ 0.28
NFE4-201ENST00000420058 OR6J1Q8NGC5 347 aa16.82■□□□□ 0.28
NFE4-201ENST00000420058 PHOSPHO2Q8TCD6 241 aa16.82■□□□□ 0.28
NFE4-201ENST00000420058 TMEM47Q9BQJ4 181 aa16.82■□□□□ 0.28
NFE4-201ENST00000420058 TSPYL2Q9H2G4 693 aaPredicted RBP16.82■□□□□ 0.28
NFE4-201ENST00000420058 ADD3Q9UEY8 706 aaKnown RBP16.82■□□□□ 0.28
NFE4-201ENST00000420058 PITPNM1O00562 1244 aa16.81■□□□□ 0.28
NFE4-201ENST00000420058 PLA2G5P39877 138 aa16.81■□□□□ 0.28
NFE4-201ENST00000420058 CPT1AP50416 773 aa16.81■□□□□ 0.28
NFE4-201ENST00000420058 RPS6P62753 249 aaKnown RBP16.81■□□□□ 0.28
NFE4-201ENST00000420058 CCDC96Q2M329 555 aa16.81■□□□□ 0.28
NFE4-201ENST00000420058 NFRKBQ6P4R8 1299 aa16.81■□□□□ 0.28
NFE4-201ENST00000420058 EPHX3Q9H6B9 360 aa16.81■□□□□ 0.28
NFE4-201ENST00000420058 GPCPD1Q9NPB8 672 aa16.81■□□□□ 0.28
NFE4-201ENST00000420058 FRMPD2Q68DX3 1309 aaPredicted RBP16.8■□□□□ 0.28
NFE4-201ENST00000420058 PTPDC1A2A3K4 754 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms