RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 ARHGAP35Q9NRY4 1499 aa5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 LRRFIP1Q32MZ4 808 aaKnown RBP5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 RTP2Q5QGT7 225 aa5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 LSRQ86X29 649 aaPredicted RBP5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 JAMLQ86YT9 394 aa5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 REXO1Q8N1G1 1221 aaKnown RBP5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 AFAP1Q8N556 730 aa5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 ANTXR1Q9H6X2 564 aa5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 PMF1-BGLAPU3KQ54 211 aa5.6□□□□□ -1.51
SEMA3A-202ENST00000420047 KIF21BO75037 1637 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 A0A1W2PQJ5 194 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 PLA2G1BP04054 148 aaKnown RBP5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 DBHP09172 617 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 NCAM1P13591 858 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 ATF2P15336 505 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 NME1P15531 152 aaKnown RBP5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 HSPA2P54652 639 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 CORO7P57737 925 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 CRTC3Q6UUV7 619 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 CYP2R1Q6VVX0 501 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 ERICH6Q7L0X2 663 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 ERMP1Q7Z2K6 904 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 FERMT3Q86UX7 667 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 TMEM192Q8IY95 271 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 NAT16Q8N8M0 369 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 FAM161BQ96MY7 647 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 SPATA25Q9BR10 227 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 SRRTQ9BXP5 876 aaKnown RBP5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 PDLIM7Q9NR12 457 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 KBTBD4Q9NVX7 518 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 FAN1Q9Y2M0 1017 aa5.59□□□□□ -1.51
SEMA3A-202ENST00000420047 CFAP43Q8NDM7 1665 aa5.59□□□□□ -1.52
SEMA3A-202ENST00000420047 EEA1Q15075 1411 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 AKNAQ7Z591 1439 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 YEATS2Q9ULM3 1422 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 TNFRSF10CO14798 259 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 EIF4A3P38919 411 aaKnown RBP5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 NLGN2Q8NFZ4 835 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 DHRS1Q96LJ7 313 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 SLC6A18Q96N87 628 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 DSCC1Q9BVC3 393 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 SLC12A9Q9BXP2 914 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 MRS2Q9HD23 443 aa5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.58□□□□□ -1.52
SEMA3A-202ENST00000420047 ABCA9Q8IUA7 1624 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 A0A1B0GTL3 188 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 MEIS3P2A8K0S8 358 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 AKAP8O43823 692 aaKnown RBP5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 NOBOXO60393 691 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 ITGB3P05106 788 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 GSTM1P09488 218 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 TNFRSF1AP19438 455 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 ADAM17P78536 824 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 PRR5P85299 388 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 ZXDAP98168 799 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 CWF19L1Q69YN2 538 aaKnown RBP5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 BICRALQ6AI39 1079 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 C7orf61Q8IZ16 206 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 ADGRG2Q8IZP9 1017 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 CARFQ8N187 725 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 ZNF526Q8TF50 670 aaPredicted RBP5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 SMPD4Q9NXE4 827 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 VTI1BQ9UEU0 232 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 ARAP3Q8WWN8 1544 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 SIGLEC1Q9BZZ2 1709 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 SCAPERQ9BY12 1400 aa5.57□□□□□ -1.52
SEMA3A-202ENST00000420047 TTC37Q6PGP7 1564 aa5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 C1QTNF3-AMACRE9PGA6 284 aa5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 NOP2P46087 812 aaKnown RBP5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 HNRNPMP52272 730 aaKnown RBP eCLIP5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 CLCQ05315 142 aa5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 DLX2Q07687 328 aaPredicted RBP5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 INTS3Q68E01 1043 aaKnown RBP5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 B3GNT8Q7Z7M8 397 aa5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 ZNF296Q8WUU4 475 aaPredicted RBP5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 LNPKQ9C0E8 428 aa5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 SUCOQ9UBS9 1254 aaKnown RBP5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 LRRIQ1Q96JM4 1722 aa5.56□□□□□ -1.52
SEMA3A-202ENST00000420047 FRMPD1Q5SYB0 1578 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 HECW2Q9P2P5 1572 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 F8W031 263 aaPredicted RBP5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 FGF10O15520 208 aaPredicted RBP5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 CNR2P34972 360 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 ZNF165P49910 485 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 GJA9P57773 515 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 EFCAB2Q5VUJ9 269 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 FBXO33Q7Z6M2 555 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 TTC9BQ8N6N2 239 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 RGS22Q8NE09 1264 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 RBM15Q96T37 977 aaKnown RBP eCLIP5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 C1QTNF3Q9BXJ4 246 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 DBR1Q9UK59 544 aaKnown RBP5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 HCFC2Q9Y5Z7 792 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 DUSP10Q9Y6W6 482 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 FANCAO15360 1455 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 KIF14Q15058 1648 aa5.55□□□□□ -1.52
SEMA3A-202ENST00000420047 ZNF644Q9H582 1327 aaPredicted RBP5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 DENND4BO75064 1496 aaPredicted RBP5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 PTPRMP28827 1452 aa5.54□□□□□ -1.52
SEMA3A-202ENST00000420047 TBC1D8O95759 1140 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms