RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 TBC1D9BQ66K14 1250 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 KRBA2Q6ZNG9 492 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 FTOQ9C0B1 505 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 IQGAP3Q86VI3 1631 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 AATKQ6ZMQ8 1374 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 BRD1O95696 1058 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 KRT15P19012 456 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 ZNF131P52739 623 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 SND1Q7KZF4 910 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 AP5M1Q9H0R1 490 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 SSH2Q76I76 1423 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 INO80B-WBP1J3KQ70 363 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 LACTBP83111 547 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 CCDC93Q567U6 631 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 DENND2CQ68D51 928 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 MIS18BP1Q6P0N0 1132 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 GPT2Q8TD30 523 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 OSBP2Q969R2 916 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 INO80BQ9C086 356 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 NRBP2Q9NSY0 501 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 LAMC1P11047 1609 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 HNRNPDLO14979 420 aaKnown RBP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 BMP3P12645 472 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 NR5A1Q13285 461 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 BRINP3Q76B58 766 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 NME8Q8N427 588 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 PTPN22Q9Y2R2 807 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 COL4A3BPQ9Y5P4 624 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 ABCC3O15438 1527 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 MYL7Q01449 175 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 CEP85LQ5SZL2 805 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 PHLDB2Q86SQ0 1253 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 ERBB4Q15303 1308 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 MAP2P11137 1827 aaKnown RBP11.65□□□□□ -0.54
COL12A1-203ENST00000416123 NPR1P16066 1061 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 TLR3O15455 904 aaKnown RBP11.65□□□□□ -0.54
COL12A1-203ENST00000416123 FYB2Q5VWT5 728 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 CC2D2BQ6DHV5 1058 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 ABI1Q8IZP0 508 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 KRT12Q99456 494 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 PRDM15P57071 1507 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-203ENST00000416123 GOLGA6CA6NDK9 693 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 GOLGA6DP0CG33 693 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 PSMD6Q15008 389 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 RAB20Q9NX57 234 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 GOLGA6AQ9NYA3 693 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 ARHGAP6O43182 974 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 SMIM5Q71RC9 77 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 LRRN2O75325 713 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 NAA35Q5VZE5 725 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 APOA5Q6Q788 366 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 CEP128Q6ZU80 1094 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 PI4KBQ9UBF8 816 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 GKAP1Q5VSY0 366 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-203ENST00000416123 SPATA24Q86W54 205 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 PALM2Q8IXS6 379 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 CNOT6LQ96LI5 555 aaKnown RBP11.65□□□□□ -0.54
COL12A1-203ENST00000416123 PIH1D3Q9NQM4 214 aaKnown RBP11.65□□□□□ -0.54
COL12A1-203ENST00000416123 KMT5AQ9NQR1 393 aa11.65□□□□□ -0.54
COL12A1-203ENST00000416123 LONP1P36776 959 aaKnown RBP11.65□□□□□ -0.55
COL12A1-203ENST00000416123 ARPP19P56211 112 aa11.65□□□□□ -0.55
COL12A1-203ENST00000416123 MTERF2Q49AM1 385 aa11.65□□□□□ -0.55
COL12A1-203ENST00000416123 HS1BP3Q53T59 392 aa11.65□□□□□ -0.55
COL12A1-203ENST00000416123 GALNT17Q6IS24 598 aa11.65□□□□□ -0.55
COL12A1-203ENST00000416123 CTAGE3PQ8IX95 158 aa11.65□□□□□ -0.55
COL12A1-203ENST00000416123 FAM184BQ9ULE4 1060 aa11.65□□□□□ -0.55
COL12A1-203ENST00000416123 ZWINTO95229 277 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 SRGAP2CP0DJJ0 459 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 ZNF445P59923 1031 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 RNASELQ05823 741 aaKnown RBP11.64□□□□□ -0.55
COL12A1-203ENST00000416123 LLGL1Q15334 1064 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 GPATCH4Q5T3I0 446 aaKnown RBP11.64□□□□□ -0.55
COL12A1-203ENST00000416123 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 MAP4K1Q92918 833 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 BCORL1Q5H9F3 1711 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 KRIT1O00522 736 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 RASGRF1Q13972 1273 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 HHATQ5VTY9 493 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 CDK8P49336 464 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 GRAPQ13588 217 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 GRAPLQ8TC17 118 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-203ENST00000416123 AFF2P51816 1311 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 HAUS2Q9NVX0 235 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 PTPN12Q05209 780 aaKnown RBP11.64□□□□□ -0.55
COL12A1-203ENST00000416123 GOLGA6BA6NDN3 693 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 THAP12O43422 761 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-203ENST00000416123 CMA1P23946 247 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 SLC12A2P55011 1212 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 OR8K1Q8NGG5 319 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 CCDC17Q96LX7 622 aa11.64□□□□□ -0.55
COL12A1-203ENST00000416123 FAM196BA6NMK8 535 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms