RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 DNAJC7Q99615 494 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 TM9SF2Q99805 663 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 IRF2BPLQ9H1B7 796 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 G3BP2Q9UN86 482 aaKnown RBP8.03□□□□□ -1.12
EPHA4-204ENST00000415749 SHANK3Q9BYB0 1731 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 MSTNO14793 375 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 SMAD7O15105 426 aaKnown RBP8.02□□□□□ -1.13
EPHA4-204ENST00000415749 ITGB2P05107 769 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 RAG1P15918 1043 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 AMPD3Q01432 767 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 NKG7Q16617 165 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 HSP90AB2PQ58FF8 381 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 PRAMEF13Q5VWM6 474 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 CDCP2Q5VXM1 449 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 NLRC3Q7RTR2 1065 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 LSRQ86X29 649 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-204ENST00000415749 TAB3Q8N5C8 712 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-204ENST00000415749 DNAJC5GQ8N7S2 189 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 PSMD1Q99460 953 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 C7orf69Q9H7B7 122 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 LGR6Q9HBX8 967 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 RIPOR2Q9Y4F9 1068 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 PHRF1Q9P1Y6 1649 aaKnown RBP8.02□□□□□ -1.13
EPHA4-204ENST00000415749 WDR17Q8IZU2 1322 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 LMO7Q8WWI1 1683 aa8.02□□□□□ -1.13
EPHA4-204ENST00000415749 ESYT3A0FGR9 886 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 CHURC1-FNTBB4DL54 471 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 GSC2O15499 205 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 IGHA1P01876 353 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 H2AFB2P0C5Z0 115 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 ARSHQ5FYA8 562 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 SEZ6L2Q6UXD5 910 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 UBE3DQ7Z6J8 389 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 PHACTR4Q8IZ21 702 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 CYB5D2Q8WUJ1 264 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 STAG1Q8WVM7 1258 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 ATG4CQ96DT6 458 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 CNNM2Q9H8M5 875 aa8.01□□□□□ -1.13
EPHA4-204ENST00000415749 KAT6BQ8WYB5 2073 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 LOC102724159A0A0B4J2E5 919 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 UPK3BL1B0FP48 263 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 UPK3BL2E5RIL1 263 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 TPD52L2O43399 206 aaKnown RBP8□□□□□ -1.13
EPHA4-204ENST00000415749 S100BP04271 92 aaPredicted RBP8□□□□□ -1.13
EPHA4-204ENST00000415749 NME1P15531 152 aaKnown RBP8□□□□□ -1.13
EPHA4-204ENST00000415749 CCNFP41002 786 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 GYS2P54840 703 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 PWP2Q15269 919 aaKnown RBP8□□□□□ -1.13
EPHA4-204ENST00000415749 INTS3Q68E01 1043 aaKnown RBP8□□□□□ -1.13
EPHA4-204ENST00000415749 HOMER1Q86YM7 354 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 C19orf47Q8N9M1 422 aaKnown RBP8□□□□□ -1.13
EPHA4-204ENST00000415749 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 SPOCK3Q9BQ16 436 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 DPH2Q9BQC3 489 aaPredicted RBP8□□□□□ -1.13
EPHA4-204ENST00000415749 CCDC113Q9H0I3 377 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 PRDM10Q9NQV6 1147 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 TFCP2L1Q9NZI6 479 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 FAN1Q9Y2M0 1017 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 SLC12A7Q9Y666 1083 aa8□□□□□ -1.13
EPHA4-204ENST00000415749 HMX2A2RU54 273 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 DYNC1LI2O43237 492 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-204ENST00000415749 DNAJA2O60884 412 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 MAP4K4O95819 1239 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-204ENST00000415749 GUCY2CP25092 1073 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 CYP27A1Q02318 531 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 IFRD2Q12894 506 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-204ENST00000415749 DOC2BQ14184 412 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 GPAT2Q6NUI2 795 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 CELF2-AS1Q8N7Q2 184 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 TMX1Q9H3N1 280 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 ANTXR1Q9H6X2 564 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 ST7Q9NRC1 585 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 C1GALT1Q9NS00 363 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 PNPLA7Q6ZV29 1317 aa7.99□□□□□ -1.13
EPHA4-204ENST00000415749 USP6P35125 1406 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 TNFRSF10CO14798 259 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 PROCP04070 461 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 GBP1P32455 592 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 PRELPP51888 382 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 CDK5R2Q13319 367 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 RNF43Q68DV7 783 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 ZAR1Q86SH2 424 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 ARHGEF25Q86VW2 580 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 XAGE3Q8WTP9 111 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 PSMG3-AS1Q96PY0 264 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 MIPEPQ99797 713 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 MYH16Q9H6N6 1097 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 MSRB2Q9Y3D2 182 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 LRRC37A3O60309 1634 aa7.98□□□□□ -1.13
EPHA4-204ENST00000415749 ADGRB1O14514 1584 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 RGS13O14921 159 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 ETV3P41162 512 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 CASP7P55210 303 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 CYP27C1Q4G0S4 372 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 LETMD1Q6P1Q0 360 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 KIAA0907Q7Z7F0 614 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-204ENST00000415749 SLC51AQ86UW1 340 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 TOP6BLQ8N6T0 577 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms