RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ARL6IP4Q66PJ3 421 aaKnown RBP13.08□□□□□ -0.32
RFFL-205ENST00000415395 SCYL3Q8IZE3 742 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 CUL5Q93034 780 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 AMNQ9BXJ7 453 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 FEM1BQ9UK73 627 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 PHIPQ8WWQ0 1821 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 LAD1O00515 517 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 PPP1R11O60927 126 aaPredicted RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 SYKP43405 635 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 GPR162Q16538 588 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 NOL9Q5SY16 702 aaKnown RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 USP50Q70EL3 339 aaPredicted RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 ELOA2Q8IYF1 753 aaPredicted RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 COA7Q96BR5 231 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 XPO4Q9C0E2 1151 aaKnown RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 AS3MTQ9HBK9 375 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 ARGLU1Q9NWB6 273 aaPredicted RBP13.07□□□□□ -0.32
RFFL-205ENST00000415395 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 DACH1Q9UI36 760 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 HPSEQ9Y251 543 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 PAPPA2Q9BXP8 1791 aa13.07□□□□□ -0.32
RFFL-205ENST00000415395 ZSCAN12O43309 604 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 PFKFB1P16118 471 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 CLK2P49760 499 aaKnown RBP13.06□□□□□ -0.32
RFFL-205ENST00000415395 USP14P54578 494 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 MYL5Q02045 173 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 DPCR1Q3MIW9 517 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
RFFL-205ENST00000415395 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 DCPSQ96C86 337 aaKnown RBP13.06□□□□□ -0.32
RFFL-205ENST00000415395 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
RFFL-205ENST00000415395 L2HGDHQ9H9P8 463 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 ZNF215Q9UL58 517 aaPredicted RBP13.06□□□□□ -0.32
RFFL-205ENST00000415395 PRR12Q9ULL5 1215 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 SCAF8Q9UPN6 1271 aaKnown RBP13.06□□□□□ -0.32
RFFL-205ENST00000415395 PHLPP2Q6ZVD8 1323 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 WDR90Q96KV7 1748 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 SSC5DA1L4H1 1573 aa13.06□□□□□ -0.32
RFFL-205ENST00000415395 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 FAM83BQ5T0W9 1011 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 SPICE1Q8N0Z3 855 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 RASGRP4Q8TDF6 673 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 KLRG1Q96E93 195 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 CCDC34Q96HJ3 373 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 PICK1Q9NRD5 415 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 TRMT1Q9NXH9 659 aaKnown RBP13.05□□□□□ -0.32
RFFL-205ENST00000415395 TUBE1Q9UJT0 475 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 PCDHA1Q9Y5I3 950 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 GLTPD2A6NH11 291 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 ADAMTS3O15072 1205 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 INPP5BP32019 993 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 PRPHP41219 470 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 FANCCQ00597 558 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 PTGDRQ13258 359 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 BMS1Q14692 1282 aaKnown RBP13.05□□□□□ -0.32
RFFL-205ENST00000415395 ZNF174Q15697 407 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 ZNF771Q7L3S4 317 aaPredicted RBP13.05□□□□□ -0.32
RFFL-205ENST00000415395 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 PPP1R13BQ96KQ4 1090 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 WRNIP1Q96S55 665 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 NAP1L4Q99733 375 aaKnown RBP13.05□□□□□ -0.32
RFFL-205ENST00000415395 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
RFFL-205ENST00000415395 PSTPIP2Q9H939 334 aa13.05□□□□□ -0.32
RFFL-205ENST00000415395 PARP14Q460N5 1801 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 SERPINC1P01008 464 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 ARID5BQ14865 1188 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 INF2Q27J81 1249 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
RFFL-205ENST00000415395 PNMA2Q9UL42 364 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 MYH7BA7E2Y1 1941 aa13.04□□□□□ -0.32
RFFL-205ENST00000415395 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 WNT7AO00755 349 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 FDX1P10109 184 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 PTPRAP18433 802 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 MCM7P33993 719 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 EPHX2P34913 555 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 C4orf32Q8N8J7 132 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 ZNF280CQ8ND82 737 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.32
RFFL-205ENST00000415395 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 GLIS2Q9BZE0 524 aaPredicted RBP13.03□□□□□ -0.32
RFFL-205ENST00000415395 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.03□□□□□ -0.32
RFFL-205ENST00000415395 BIN2Q9UBW5 565 aaPredicted RBP13.03□□□□□ -0.32
RFFL-205ENST00000415395 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
RFFL-205ENST00000415395 CCDC66A2RUB6 948 aa13.02□□□□□ -0.32
RFFL-205ENST00000415395 FOSP01100 380 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms