RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 TBCKQ8TEA7 893 aa11.06□□□□□ -0.64
RIF1-202ENST00000414861 SPATA32Q96LK8 384 aa11.06□□□□□ -0.64
RIF1-202ENST00000414861 CFAP45Q9UL16 551 aa11.06□□□□□ -0.64
RIF1-202ENST00000414861 MRVI1Q9Y6F6 885 aa11.06□□□□□ -0.64
RIF1-202ENST00000414861 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
RIF1-202ENST00000414861 STAT3P40763 770 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 GRM1Q13255 1194 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 TTC38Q5R3I4 469 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 ATL3Q6DD88 541 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 SLC30A10Q6XR72 485 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 ANO3Q9BYT9 981 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 SCAND2PQ9GZW5 306 aaPredicted RBP11.05□□□□□ -0.64
RIF1-202ENST00000414861 GLT8D2Q9H1C3 349 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 COL20A1Q9P218 1284 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 RBPJLQ9UBG7 517 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 SLC45A1Q9Y2W3 748 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 DDX11L8A8MPP1 907 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 HSD17B4P51659 736 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 ZNF174Q15697 407 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 CYP4F22Q6NT55 531 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 FCHSD1Q86WN1 690 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 SPATC1LQ9H0A9 340 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.05□□□□□ -0.64
RIF1-202ENST00000414861 RCOR1Q9UKL0 485 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
RIF1-202ENST00000414861 NOL7Q9UMY1 257 aaKnown RBP11.05□□□□□ -0.64
RIF1-202ENST00000414861 MANSC4A6NHS7 340 aaPredicted RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 GCOM1H8Y6P7 765 aaPredicted RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 YEATS4O95619 227 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 POLR2MP0CAP2 368 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 TRAPPC10P48553 1259 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 GHRHRQ02643 423 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 AP3B2Q13367 1082 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 STK38Q15208 465 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 Q3C1V9 767 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 SMCR8Q8TEV9 937 aaPredicted RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 HHIPL1Q96JK4 782 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 MOV10L1Q9BXT6 1211 aaKnown RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 ELP1O95163 1332 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 MARCKSP29966 332 aaPredicted RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 MCM7P33993 719 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 RPS6P62753 249 aaKnown RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 LETM2Q2VYF4 491 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 NEK8Q86SG6 692 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 RIOX2Q8IUF8 465 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 CRYGNQ8WXF5 182 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 PURBQ96QR8 312 aaKnown RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 PNMA2Q9UL42 364 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 RABGAP1Q9Y3P9 1069 aa11.04□□□□□ -0.64
RIF1-202ENST00000414861 ZNFX1Q9P2E3 1918 aaKnown RBP11.04□□□□□ -0.64
RIF1-202ENST00000414861 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 SPTLC2O15270 562 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 TDP2O95551 362 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 APLP1P51693 650 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 CCDC102AQ96A19 550 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 ACAD9Q9H845 621 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 A1CFQ9NQ94 594 aaKnown RBP11.03□□□□□ -0.64
RIF1-202ENST00000414861 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 DOCK3Q8IZD9 2030 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 ERVK-9P63128 1117 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 ERVK-24P63145 666 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 UBXN2AP68543 259 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 RNF207Q6ZRF8 634 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 MCF2L2Q86YR7 1114 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 ANKRD13CQ8N6S4 541 aa11.03□□□□□ -0.64
RIF1-202ENST00000414861 SYTL5Q8TDW5 730 aaPredicted RBP11.03□□□□□ -0.64
RIF1-202ENST00000414861 PARK7Q99497 189 aaKnown RBP11.03□□□□□ -0.64
RIF1-202ENST00000414861 PLXNB2O15031 1838 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 SLC37A4O43826 429 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 CCNT1O60563 726 aaKnown RBP11.02□□□□□ -0.64
RIF1-202ENST00000414861 FOSP01100 380 aaPredicted RBP11.02□□□□□ -0.64
RIF1-202ENST00000414861 ERCC3P19447 782 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 SREBF1P36956 1147 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 ARHGAP4P98171 946 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 GRIN1Q05586 938 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 PTGDRQ13258 359 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 BAATQ14032 418 aaPredicted RBP11.02□□□□□ -0.64
RIF1-202ENST00000414861 TKFCQ3LXA3 575 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 NCAPG2Q86XI2 1143 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 IFNL1Q8IU54 200 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 KCNG4Q8TDN1 519 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 PORCNQ9H237 461 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 TMEM60Q9H2L4 133 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 PCDHA7Q9UN72 937 aa11.02□□□□□ -0.64
RIF1-202ENST00000414861 ADGRA2Q96PE1 1338 aa11.02□□□□□ -0.65
RIF1-202ENST00000414861 RASSF10A6NK89 507 aa11.02□□□□□ -0.65
RIF1-202ENST00000414861 ME1P48163 572 aa11.02□□□□□ -0.65
RIF1-202ENST00000414861 HTRA3P83110 453 aa11.02□□□□□ -0.65
RIF1-202ENST00000414861 C4orf32Q8N8J7 132 aa11.02□□□□□ -0.65
RIF1-202ENST00000414861 IL31RAQ8NI17 732 aa11.02□□□□□ -0.65
RIF1-202ENST00000414861 GPT2Q8TD30 523 aa11.02□□□□□ -0.65
RIF1-202ENST00000414861 CYP39A1Q9NYL5 469 aa11.02□□□□□ -0.65
RIF1-202ENST00000414861 MCM3APO60318 1980 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 AOC2O75106 756 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 ATP2C1P98194 919 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms