RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SGPL1O95470 568 aa15.26■□□□□ 0.03
HDAC8-210ENST00000412342 ZNF865P0CJ78 1059 aaPredicted RBP15.26■□□□□ 0.03
HDAC8-210ENST00000412342 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
HDAC8-210ENST00000412342 PRAMEF19Q5SWL8 479 aa15.26■□□□□ 0.03
HDAC8-210ENST00000412342 LHX8Q68G74 356 aa15.26■□□□□ 0.03
HDAC8-210ENST00000412342 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
HDAC8-210ENST00000412342 KIF2CQ99661 725 aa15.26■□□□□ 0.03
HDAC8-210ENST00000412342 PDRG1Q9NUG6 133 aa15.26■□□□□ 0.03
HDAC8-210ENST00000412342 MRPL11Q9Y3B7 192 aaKnown RBP15.26■□□□□ 0.03
HDAC8-210ENST00000412342 PCDHA1Q9Y5I3 950 aa15.26■□□□□ 0.03
HDAC8-210ENST00000412342 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
HDAC8-210ENST00000412342 PTPDC1A2A3K4 754 aa15.25■□□□□ 0.03
HDAC8-210ENST00000412342 ADD1P35611 737 aaKnown RBP15.25■□□□□ 0.03
HDAC8-210ENST00000412342 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC8-210ENST00000412342 HSD17B4P51659 736 aa15.25■□□□□ 0.03
HDAC8-210ENST00000412342 PPP2R5BQ15173 497 aa15.25■□□□□ 0.03
HDAC8-210ENST00000412342 NTRK3Q16288 839 aa15.25■□□□□ 0.03
HDAC8-210ENST00000412342 ARMCX2Q7L311 632 aa15.25■□□□□ 0.03
HDAC8-210ENST00000412342 SYTL5Q8TDW5 730 aaPredicted RBP15.25■□□□□ 0.03
HDAC8-210ENST00000412342 PIBF1Q8WXW3 757 aa15.25■□□□□ 0.03
HDAC8-210ENST00000412342 RRP36Q96EU6 259 aaKnown RBP15.25■□□□□ 0.03
HDAC8-210ENST00000412342 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.25■□□□□ 0.03
HDAC8-210ENST00000412342 LOC102724159A0A0B4J2E5 919 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 hCG_1642624A0A1W2PR95 340 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 SEPT4O43236 478 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 EDNRBP24530 442 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 CALML3P27482 149 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 RBM25P49756 843 aaKnown RBP15.24■□□□□ 0.03
HDAC8-210ENST00000412342 MNX1P50219 401 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-210ENST00000412342 ALDH5A1P51649 535 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-210ENST00000412342 PWP2Q15269 919 aaKnown RBP15.24■□□□□ 0.03
HDAC8-210ENST00000412342 UBE2Q1Q7Z7E8 422 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 MCF2L2Q86YR7 1114 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 CCDC82Q8N4S0 544 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 ZNF274Q96GC6 653 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-210ENST00000412342 LARP6Q9BRS8 491 aaKnown RBP15.24■□□□□ 0.03
HDAC8-210ENST00000412342 DDX20Q9UHI6 824 aaKnown RBP15.24■□□□□ 0.03
HDAC8-210ENST00000412342 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
HDAC8-210ENST00000412342 AK2P54819 239 aa15.23■□□□□ 0.03
HDAC8-210ENST00000412342 TRAF1Q13077 416 aa15.23■□□□□ 0.03
HDAC8-210ENST00000412342 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
HDAC8-210ENST00000412342 KIAA1217Q5T5P2 1943 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 ASB14A6NK59 587 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 ADCY6O43306 1168 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 TYW1BQ6NUM6 668 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 SAMD3Q8N6K7 520 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 DNERQ8NFT8 737 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 TAAR1Q96RJ0 339 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 C22orf23Q9BZE7 217 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 ABHD16BQ9H3Z7 469 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 NCOA5Q9HCD5 579 aaKnown RBP15.22■□□□□ 0.03
HDAC8-210ENST00000412342 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
HDAC8-210ENST00000412342 ADD3Q9UEY8 706 aaKnown RBP15.22■□□□□ 0.03
HDAC8-210ENST00000412342 TPCN1Q9ULQ1 816 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 NAP1L2Q9ULW6 460 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-210ENST00000412342 CNPY2Q9Y2B0 182 aa15.22■□□□□ 0.03
HDAC8-210ENST00000412342 MKI67P46013 3256 aaKnown RBP15.22■□□□□ 0.03
HDAC8-210ENST00000412342 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
HDAC8-210ENST00000412342 MSCO60682 206 aa15.21■□□□□ 0.03
HDAC8-210ENST00000412342 CFBP00751 764 aa15.21■□□□□ 0.03
HDAC8-210ENST00000412342 IFNAR1P17181 557 aa15.21■□□□□ 0.03
HDAC8-210ENST00000412342 CAPN2P17655 700 aa15.21■□□□□ 0.03
HDAC8-210ENST00000412342 CNGA1P29973 690 aa15.21■□□□□ 0.03
HDAC8-210ENST00000412342 CCT2P78371 535 aaKnown RBP15.21■□□□□ 0.03
HDAC8-210ENST00000412342 ACVR2BQ13705 512 aa15.21■□□□□ 0.03
HDAC8-210ENST00000412342 WWC2Q6AWC2 1192 aa15.21■□□□□ 0.03
HDAC8-210ENST00000412342 GPKOWQ92917 476 aaPredicted RBP eCLIP15.21■□□□□ 0.03
HDAC8-210ENST00000412342 ZHX1Q9UKY1 873 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-210ENST00000412342 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-210ENST00000412342 ALPK3Q96L96 1907 aa15.21■□□□□ 0.02
HDAC8-210ENST00000412342 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
HDAC8-210ENST00000412342 TNRC18O15417 2968 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-210ENST00000412342 MEIS2O14770 477 aa15.2■□□□□ 0.02
HDAC8-210ENST00000412342 AKR1A1P14550 325 aa15.2■□□□□ 0.02
HDAC8-210ENST00000412342 HOXA13P31271 388 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-210ENST00000412342 NEK4P51957 841 aa15.2■□□□□ 0.02
HDAC8-210ENST00000412342 PKN1Q16512 942 aa15.2■□□□□ 0.02
HDAC8-210ENST00000412342 ANO1Q5XXA6 986 aa15.2■□□□□ 0.02
HDAC8-210ENST00000412342 TAPT1Q6NXT6 567 aa15.2■□□□□ 0.02
HDAC8-210ENST00000412342 ANKLE1Q8NAG6 615 aa15.2■□□□□ 0.02
HDAC8-210ENST00000412342 LENG1Q96BZ8 264 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-210ENST00000412342 GCOM1H8Y6P7 765 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-210ENST00000412342 STXBP3O00186 592 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 PIK3CDO00329 1044 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 PRPF3O43395 683 aaKnown RBP15.19■□□□□ 0.02
HDAC8-210ENST00000412342 PFKFB2O60825 505 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 LARGE1O95461 756 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 TFRCP02786 760 aaKnown RBP15.19■□□□□ 0.02
HDAC8-210ENST00000412342 POLR2MP0CAP2 368 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 SCRN1Q12765 414 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 PFKFB3Q16875 520 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-210ENST00000412342 CCDC144BQ3MJ40 725 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 PPP1R18Q6NYC8 613 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 FBXO16Q8IX29 292 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-210ENST00000412342 DIS3LQ8TF46 1054 aaKnown RBP15.19■□□□□ 0.02
HDAC8-210ENST00000412342 PHKBQ93100 1093 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 RMDN3Q96TC7 470 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-210ENST00000412342 BACH2Q9BYV9 841 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms