RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 PCDH11XQ9BZA7 1347 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 PCDH11YQ9BZA8 1340 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 DUOX2Q9NRD8 1548 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 WDR64B1ANS9 1081 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 H7C0S8 307 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 CPP00450 1065 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 FOSP01100 380 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-203ENST00000412145 GSNP06396 782 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 CA4P22748 312 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 EEF1B2P24534 225 aaKnown RBP8.01□□□□□ -1.13
PTPN3-203ENST00000412145 STX17P56962 302 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 KLHL7Q8IXQ5 586 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 MRPS26Q9BYN8 205 aaKnown RBP8.01□□□□□ -1.13
PTPN3-203ENST00000412145 NVLO15381 856 aaKnown RBP8.01□□□□□ -1.13
PTPN3-203ENST00000412145 MSH2P43246 934 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 CHURC1Q8WUH1 139 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 PPME1Q9Y570 386 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 PLXNC1O60486 1568 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 KCNJ18B7U540 433 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 PGRMC1O00264 195 aaKnown RBP8.01□□□□□ -1.13
PTPN3-203ENST00000412145 MAP3K13O43283 966 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 H2AFZP0C0S5 128 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 KCNJ12Q14500 433 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 H2AFVQ71UI9 128 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 TEX9Q8N6V9 391 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 TRIML2Q8N7C3 387 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 DEPTORQ8TB45 409 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 PLCH2O75038 1416 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 WDR7Q9Y4E6 1490 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 AP3B1O00203 1094 aa8.01□□□□□ -1.13
PTPN3-203ENST00000412145 XPAP23025 273 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-203ENST00000412145 GTPBP10A4D1E9 387 aaKnown RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 CFAP73A6NFT4 308 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 KRT37O76014 449 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 ETF1P62495 437 aaKnown RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 PTK2Q05397 1052 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 FAM160B1Q5W0V3 765 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 PPP4R3CPQ6ZMV5 832 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 APPBP2Q92624 585 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 ITGB1BP2Q9UKP3 347 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 CHGBP05060 677 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 PARVBQ9HBI1 364 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 SEPT3Q9UH03 358 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 SYCE1LA8MT33 242 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 ZNF263O14978 683 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 CWF19L2Q2TBE0 894 aaKnown RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 MAGEB6Q8N7X4 407 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 DSCC1Q9BVC3 393 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 KRT82Q9NSB4 513 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 SESN1Q9Y6P5 492 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 NOS1P29475 1434 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 GTPBP6O43824 516 aaPredicted RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 TMTC4Q5T4D3 741 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 C2CD5Q86YS7 1000 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 NFU1Q9UMS0 254 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 POLR2DO15514 142 aaKnown RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 TNNI1P19237 187 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 DEFA1P59665 94 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 DEFA3P59666 94 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 TAF1BQ53T94 588 aaPredicted RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 ODR4Q5SWX8 454 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 TTC16Q8NEE8 873 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8□□□□□ -1.13
PTPN3-203ENST00000412145 LZICQ8WZA0 190 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 SAAL1Q96ER3 474 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 RMDN2Q96LZ7 410 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 FGD4Q96M96 766 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 TRIM62Q9BVG3 475 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 MAGEB5Q9BZ81 275 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 C10orf88Q9H8K7 445 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 ANLNQ9NQW6 1124 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 PAIP2BQ9ULR5 123 aaKnown RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 KPNA7A9QM74 516 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 ECEL1O95672 775 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 CCDC159P0C7I6 412 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 CIITAP33076 1130 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 TRADDQ15628 312 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 TERB1Q8NA31 727 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 H0Y626 953 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 PODXLO00592 558 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 TRIM16O95361 564 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 CHMLP26374 656 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 TMED1Q13445 227 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 ARHGEF25Q86VW2 580 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 JARID2Q92833 1246 aaPredicted RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 DHTKD1Q96HY7 919 aaPredicted RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 PPP1R2P1Q96PQ5 205 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 SH3GL3Q99963 347 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 GCOM2Q9BZD3 368 aaPredicted RBP8□□□□□ -1.13
PTPN3-203ENST00000412145 PARP3Q9Y6F1 533 aa8□□□□□ -1.13
PTPN3-203ENST00000412145 KRT87PA6NCN2 255 aa7.99□□□□□ -1.13
PTPN3-203ENST00000412145 CCDC188H7C350 402 aa7.99□□□□□ -1.13
PTPN3-203ENST00000412145 KCNK3O14649 394 aa7.99□□□□□ -1.13
PTPN3-203ENST00000412145 BASP1P80723 227 aaKnown RBP7.99□□□□□ -1.13
PTPN3-203ENST00000412145 SKOR1P84550 965 aa7.99□□□□□ -1.13
PTPN3-203ENST00000412145 UIMC1Q96RL1 719 aa7.99□□□□□ -1.13
PTPN3-203ENST00000412145 CNPY3Q9BT09 278 aa7.99□□□□□ -1.13
PTPN3-203ENST00000412145 TRIM31Q9BZY9 425 aa7.99□□□□□ -1.13
PTPN3-203ENST00000412145 FAM95CA0A1B0GW59 222 aa7.99□□□□□ -1.13
PTPN3-203ENST00000412145 C16orf96A6NNT2 1141 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms