RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 GMCL1Q96IK5 515 aa27.61■■■□□ 2.01
VRK2-202ENST00000412104 GLT8D2Q9H1C3 349 aa27.61■■■□□ 2.01
VRK2-202ENST00000412104 PCDHA1Q9Y5I3 950 aa27.61■■■□□ 2.01
VRK2-202ENST00000412104 CLRN2A0PK11 232 aa27.6■■■□□ 2.01
VRK2-202ENST00000412104 TEX33O43247 280 aa27.6■■■□□ 2.01
VRK2-202ENST00000412104 NUP88Q99567 741 aaPredicted RBP27.6■■■□□ 2.01
VRK2-202ENST00000412104 TRIM9Q9C026 710 aa27.6■■■□□ 2.01
VRK2-202ENST00000412104 HERC5Q9UII4 1024 aaKnown RBP27.6■■■□□ 2.01
VRK2-202ENST00000412104 HDAC9Q9UKV0 1011 aa27.6■■■□□ 2.01
VRK2-202ENST00000412104 TMEM139Q8IV31 216 aa27.59■■■□□ 2.01
VRK2-202ENST00000412104 PPP1R13BQ96KQ4 1090 aa27.59■■■□□ 2.01
VRK2-202ENST00000412104 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.59■■■□□ 2.01
VRK2-202ENST00000412104 ZNF70Q9UC06 446 aaPredicted RBP27.59■■■□□ 2.01
VRK2-202ENST00000412104 GRB10Q13322 594 aa27.59■■■□□ 2.01
VRK2-202ENST00000412104 DLGAP5Q15398 846 aa27.59■■■□□ 2.01
VRK2-202ENST00000412104 GIMAP8Q8ND71 665 aaPredicted RBP27.59■■■□□ 2.01
VRK2-202ENST00000412104 C7orf25Q9BPX7 421 aa27.59■■■□□ 2.01
VRK2-202ENST00000412104 RAB34Q9BZG1 259 aa27.59■■■□□ 2.01
VRK2-202ENST00000412104 DDX25Q9UHL0 483 aaKnown RBP27.59■■■□□ 2.01
VRK2-202ENST00000412104 FILIP1LQ4L180 1135 aa27.58■■■□□ 2.01
VRK2-202ENST00000412104 TC2NQ8N9U0 490 aa27.58■■■□□ 2.01
VRK2-202ENST00000412104 LIMA1Q9UHB6 759 aaKnown RBP27.58■■■□□ 2.01
VRK2-202ENST00000412104 ZBTB12Q9Y330 459 aaPredicted RBP27.58■■■□□ 2.01
VRK2-202ENST00000412104 POTEMA6NI47 508 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L15C9J2P7 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L13C9JLJ4 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L11C9JVI0 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L18D6R9N7 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L22D6RA61 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L17D6RBQ6 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L19D6RCP7 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L20D6RJB6 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 GCFC2P16383 781 aaKnown RBP27.57■■■□□ 2
VRK2-202ENST00000412104 PBX1P40424 430 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L24Q0WX57 530 aa27.57■■■□□ 2
VRK2-202ENST00000412104 PDIA5Q14554 519 aa27.57■■■□□ 2
VRK2-202ENST00000412104 USP17L6PQ6QN14 398 aa27.57■■■□□ 2
VRK2-202ENST00000412104 OGFOD1Q8N543 542 aa27.57■■■□□ 2
VRK2-202ENST00000412104 SLC16A10Q8TF71 515 aa27.57■■■□□ 2
VRK2-202ENST00000412104 PAXBP1Q9Y5B6 917 aa27.57■■■□□ 2
VRK2-202ENST00000412104 GOLGB1Q14789 3259 aaKnown RBP27.57■■■□□ 2
VRK2-202ENST00000412104 SPAG1Q07617 926 aa27.57■■■□□ 2
VRK2-202ENST00000412104 KRT31Q15323 416 aa27.57■■■□□ 2
VRK2-202ENST00000412104 PNMA5Q96PV4 448 aa27.57■■■□□ 2
VRK2-202ENST00000412104 A0A1W2PRG0 241 aa27.56■■■□□ 2
VRK2-202ENST00000412104 ASIC1P78348 528 aa27.56■■■□□ 2
VRK2-202ENST00000412104 AMPD3Q01432 767 aa27.56■■■□□ 2
VRK2-202ENST00000412104 STIM1Q13586 685 aa27.56■■■□□ 2
VRK2-202ENST00000412104 SPDYE2Q495Y8 402 aa27.56■■■□□ 2
VRK2-202ENST00000412104 FAM151AQ8WW52 585 aa27.56■■■□□ 2
VRK2-202ENST00000412104 STK17AQ9UEE5 414 aa27.56■■■□□ 2
VRK2-202ENST00000412104 CNTNAP1P78357 1384 aa27.56■■■□□ 2
VRK2-202ENST00000412104 TRIM49BA6NDI0 452 aa27.55■■■□□ 2
VRK2-202ENST00000412104 BMP3P12645 472 aa27.55■■■□□ 2
VRK2-202ENST00000412104 ADKP55263 362 aaKnown RBP27.55■■■□□ 2
VRK2-202ENST00000412104 SYDE2Q5VT97 1194 aa27.55■■■□□ 2
VRK2-202ENST00000412104 ZNF592Q92610 1267 aa27.55■■■□□ 2
VRK2-202ENST00000412104 HAS1Q92839 578 aa27.55■■■□□ 2
VRK2-202ENST00000412104 CCDC47Q96A33 483 aaKnown RBP27.55■■■□□ 2
VRK2-202ENST00000412104 NAP1L4Q99733 375 aaKnown RBP27.55■■■□□ 2
VRK2-202ENST00000412104 AMNQ9BXJ7 453 aa27.55■■■□□ 2
VRK2-202ENST00000412104 BLOC1S4Q9NUP1 217 aa27.55■■■□□ 2
VRK2-202ENST00000412104 LRRC10BA6NIK2 292 aa27.55■■■□□ 2
VRK2-202ENST00000412104 KCNJ18B7U540 433 aa27.55■■■□□ 2
VRK2-202ENST00000412104 CCT6AP40227 531 aaKnown RBP27.55■■■□□ 2
VRK2-202ENST00000412104 SNAP25P60880 206 aa27.55■■■□□ 2
VRK2-202ENST00000412104 IKQ13123 557 aaPredicted RBP27.55■■■□□ 2
VRK2-202ENST00000412104 KCNJ12Q14500 433 aa27.55■■■□□ 2
VRK2-202ENST00000412104 TCP11X2Q5H9J9 407 aa27.55■■■□□ 2
VRK2-202ENST00000412104 BAG1Q99933 345 aaPredicted RBP27.55■■■□□ 2
VRK2-202ENST00000412104 ANO3Q9BYT9 981 aa27.55■■■□□ 2
VRK2-202ENST00000412104 VPS33BQ9H267 617 aa27.55■■■□□ 2
VRK2-202ENST00000412104 EXOC1Q9NV70 894 aa27.55■■■□□ 2
VRK2-202ENST00000412104 SYNPO2Q9UMS6 1093 aa27.55■■■□□ 2
VRK2-202ENST00000412104 H7C1D1 291 aa27.54■■■□□ 2
VRK2-202ENST00000412104 PSMA7O14818 248 aa27.54■■■□□ 2
VRK2-202ENST00000412104 ARHGAP6O43182 974 aa27.54■■■□□ 2
VRK2-202ENST00000412104 SNX29Q8TEQ0 813 aa27.54■■■□□ 2
VRK2-202ENST00000412104 CDK5RAP3Q96JB5 506 aa27.54■■■□□ 2
VRK2-202ENST00000412104 KIF2AO00139 706 aaPredicted RBP27.53■■■□□ 2
VRK2-202ENST00000412104 CCP110O43303 1012 aa27.53■■■□□ 2
VRK2-202ENST00000412104 PMS1P54277 932 aaKnown RBP27.53■■■□□ 2
VRK2-202ENST00000412104 PDE4DQ08499 809 aa27.53■■■□□ 2
VRK2-202ENST00000412104 KRT79Q5XKE5 535 aa27.53■■■□□ 2
VRK2-202ENST00000412104 SV2BQ7L1I2 683 aa27.53■■■□□ 2
VRK2-202ENST00000412104 FCHSD1Q86WN1 690 aa27.53■■■□□ 2
VRK2-202ENST00000412104 NIM1KQ8IY84 436 aa27.53■■■□□ 2
VRK2-202ENST00000412104 ANKRD20A12PQ8NF67 263 aa27.53■■■□□ 2
VRK2-202ENST00000412104 ZNRF3Q9ULT6 936 aa27.53■■■□□ 2
VRK2-202ENST00000412104 MEIS2O14770 477 aa27.53■■■□□ 2
VRK2-202ENST00000412104 COPB1P53618 953 aaKnown RBP27.53■■■□□ 2
VRK2-202ENST00000412104 BTNL9Q6UXG8 535 aa27.53■■■□□ 2
VRK2-202ENST00000412104 FBXO11Q86XK2 927 aa27.53■■■□□ 2
VRK2-202ENST00000412104 LARP4BQ92615 738 aaKnown RBP27.53■■■□□ 2
VRK2-202ENST00000412104 STX10O60499 249 aa27.52■■■□□ 2
VRK2-202ENST00000412104 AP3B2Q13367 1082 aa27.52■■■□□ 2
VRK2-202ENST00000412104 NUDT12Q9BQG2 462 aa27.52■■■□□ 2
VRK2-202ENST00000412104 VEZTQ9HBM0 779 aa27.52■■■□□ 2
VRK2-202ENST00000412104 ITIH6Q6UXX5 1313 aa27.51■■■□□ 2
VRK2-202ENST00000412104 AKR1B15C9JRZ8 316 aaPredicted RBP27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms