RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 AMPD2Q01433 879 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 EEF1DP3Q658K8 133 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 VHLLQ6RSH7 139 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 CPNE8Q86YQ8 564 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 ARHGEF39Q8N4T4 335 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 ZNF513Q8N8E2 541 aaPredicted RBP3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 SEC16BQ96JE7 1060 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 KCNC2Q96PR1 638 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 CCSER2Q9H7U1 834 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 APEX2Q9UBZ4 518 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 SUGT1Q9Y2Z0 365 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 RWDD3Q9Y3V2 267 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 IRS2Q9Y4H2 1338 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 A0A0G2JLL6 359 aaPredicted RBP3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 SRGAP3O43295 1099 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 FBLN1P23142 703 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 IGFBP6P24592 240 aaPredicted RBP3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 CORO7P57737 925 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 SYT8Q8NBV8 401 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 NLGN2Q8NFZ4 835 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 RCC1LQ96I51 464 aaKnown RBP3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 LGR4Q9BXB1 951 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 BCAS3Q9H6U6 928 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 GULP1Q9UBP9 304 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 RAPGEFL1Q9UHV5 662 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 DBR1Q9UK59 544 aaKnown RBP3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 AKT3Q9Y243 479 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 BACE2Q9Y5Z0 518 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 MRVI1Q9Y6F6 885 aa3.39□□□□□ -1.87
RNU2-54P-201ENST00000410299 NPHP3-ACAD11A0A0J9YXS1 232 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 ANKRD34BA5PLL1 514 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 OTOL1A6NHN0 477 aaPredicted RBP3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 KCNH1O95259 989 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 GLI4P10075 376 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 ATF2P15336 505 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 PFKLP17858 780 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 ATF4P18848 351 aaPredicted RBP3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 MC3RP41968 323 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 GRB10Q13322 594 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 TARBP2Q15633 366 aaKnown RBP3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 ZDHHC14Q8IZN3 488 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 ADGRG2Q8IZP9 1017 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 LZTR1Q8N653 840 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 FEZF2Q8TBJ5 459 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 XYLT2Q9H1B5 865 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 GPRC5CQ9NQ84 441 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 CLEC1BQ9P126 229 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 STRIP2Q9ULQ0 834 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 EMC9Q9Y3B6 208 aa3.38□□□□□ -1.87
RNU2-54P-201ENST00000410299 C7orf72A4D263 438 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 FFAR3O14843 346 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 SMAD7O15105 426 aaKnown RBP3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 SASH1O94885 1247 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 ASGR2P07307 311 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 PLS3P13797 630 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 PAMP19021 973 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 ERCC5P28715 1186 aaPredicted RBP3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 SCRN1Q12765 414 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 MBLAC2Q68D91 279 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 LINC01356Q8N9X3 169 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 TP53I13Q8NBR0 393 aaPredicted RBP3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 BVESQ8NE79 360 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 USP33Q8TEY7 942 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 RELTQ969Z4 430 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 PPP1R14AQ96A00 147 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 APBA2Q99767 749 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 MTA3Q9BTC8 594 aa3.37□□□□□ -1.87
RNU2-54P-201ENST00000410299 A0A1B0GTL3 188 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 B2RBV5 119 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 TBX1O43435 398 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 PLA2G1BP04054 148 aaKnown RBP3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 FUCA1P04066 466 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 THBDP07204 575 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 PMLP29590 882 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 FOXO4P98177 505 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 NCAPHQ15003 741 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 LARP1BQ659C4 914 aaKnown RBP3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 GTF2IRD2BQ6EKJ0 949 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 C6orf15Q6UXA7 325 aaPredicted RBP3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 GTF2IRD2Q86UP8 949 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 CABP7Q86V35 215 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 FNIP1Q8TF40 1166 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 ALG3Q92685 438 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 DPF3Q92784 378 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 COPS5Q92905 334 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 ZNF428Q96B54 188 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 MRGPRX3Q96LB0 322 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 KRTAP9-3Q9BYQ3 159 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 CAPN10Q9HC96 672 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 FAN1Q9Y2M0 1017 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 SIT1Q9Y3P8 196 aa3.36□□□□□ -1.87
RNU2-54P-201ENST00000410299 TRBV23OR9-2A0A075B6M9 112 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 NOP56O00567 594 aaKnown RBP3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 NPHS1O60500 1241 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 FOXD2O60548 495 aaPredicted RBP3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 NTRK1P04629 796 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 SSBP05455 408 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 ITGAVP06756 1048 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 NCAM1P13591 858 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms