RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CCDC51Q96ER9 411 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.04
LIMS1-205ENST00000410093 GMCL1Q96IK5 515 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 MTMR9Q96QG7 549 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 C7orf25Q9BPX7 421 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 UBA5Q9GZZ9 404 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 TMEM60Q9H2L4 133 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 FAM198AQ9UFP1 575 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 FRMPD2Q68DX3 1309 aaPredicted RBP15.27■□□□□ 0.03
LIMS1-205ENST00000410093 TPM1P09493 284 aa15.27■□□□□ 0.03
LIMS1-205ENST00000410093 USP11P51784 963 aa15.27■□□□□ 0.03
LIMS1-205ENST00000410093 AP3B2Q13367 1082 aa15.27■□□□□ 0.03
LIMS1-205ENST00000410093 TRIM14Q14142 442 aa15.27■□□□□ 0.03
LIMS1-205ENST00000410093 KARSQ15046 597 aaKnown RBP15.27■□□□□ 0.03
LIMS1-205ENST00000410093 CALCRLQ16602 461 aa15.27■□□□□ 0.03
LIMS1-205ENST00000410093 CEP135Q66GS9 1140 aa15.27■□□□□ 0.03
LIMS1-205ENST00000410093 PNMA8AQ86V59 439 aaPredicted RBP15.27■□□□□ 0.03
LIMS1-205ENST00000410093 MXD3Q9BW11 206 aa15.27■□□□□ 0.03
LIMS1-205ENST00000410093 GPCPD1Q9NPB8 672 aa15.27■□□□□ 0.03
LIMS1-205ENST00000410093 LIMA1Q9UHB6 759 aaKnown RBP15.27■□□□□ 0.03
LIMS1-205ENST00000410093 BICDL2A1A5D9 508 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 PSMA7O14818 248 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 ADAMTS3O15072 1205 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 SLC1A4P43007 532 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 SEPT2Q15019 361 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 ABCB5Q2M3G0 1257 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 NAALADL2Q58DX5 795 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 CNNM4Q6P4Q7 775 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 FOXR2Q6PJQ5 311 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 LDHDQ86WU2 507 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 ZSCAN29Q8IWY8 852 aaPredicted RBP15.26■□□□□ 0.03
LIMS1-205ENST00000410093 KIF18AQ8NI77 898 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 PANX2Q96RD6 677 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 TAF1DQ9H5J8 278 aaPredicted RBP15.26■□□□□ 0.03
LIMS1-205ENST00000410093 BIN2Q9UBW5 565 aaPredicted RBP15.26■□□□□ 0.03
LIMS1-205ENST00000410093 ZNRF3Q9ULT6 936 aa15.26■□□□□ 0.03
LIMS1-205ENST00000410093 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.26■□□□□ 0.03
LIMS1-205ENST00000410093 FOSP01100 380 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-205ENST00000410093 EEF2P13639 858 aaKnown RBP15.25■□□□□ 0.03
LIMS1-205ENST00000410093 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
LIMS1-205ENST00000410093 EPHX2P34913 555 aa15.25■□□□□ 0.03
LIMS1-205ENST00000410093 ARID5BQ14865 1188 aa15.25■□□□□ 0.03
LIMS1-205ENST00000410093 RBM26Q5T8P6 1007 aaKnown RBP15.25■□□□□ 0.03
LIMS1-205ENST00000410093 SLFN13Q68D06 897 aa15.25■□□□□ 0.03
LIMS1-205ENST00000410093 ADSSL1Q8N142 457 aa15.25■□□□□ 0.03
LIMS1-205ENST00000410093 GIMAP8Q8ND71 665 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-205ENST00000410093 DPF2Q92785 391 aa15.25■□□□□ 0.03
LIMS1-205ENST00000410093 C16orf45Q96MC5 204 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-205ENST00000410093 MTRQ99707 1265 aa15.25■□□□□ 0.03
LIMS1-205ENST00000410093 PSTPIP2Q9H939 334 aa15.25■□□□□ 0.03
LIMS1-205ENST00000410093 ADD3Q9UEY8 706 aaKnown RBP15.25■□□□□ 0.03
LIMS1-205ENST00000410093 PVALEFA0A1B0GWK0 134 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 DDTLA6NHG4 134 aaPredicted RBP15.24■□□□□ 0.03
LIMS1-205ENST00000410093 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
LIMS1-205ENST00000410093 ICA1Q05084 483 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 TNIP1Q15025 636 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 JAKMIP3Q5VZ66 844 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 RSBN1LQ6PCB5 846 aaPredicted RBP15.24■□□□□ 0.03
LIMS1-205ENST00000410093 BTNL9Q6UXG8 535 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 PPFIBP1Q86W92 1011 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 FAM114A1Q8IWE2 563 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 KCTD17Q8N5Z5 321 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 MTMR14Q8NCE2 650 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 MED15Q96RN5 788 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 CPVLQ9H3G5 476 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 THAP9Q9H5L6 903 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 DNAJC18Q9H819 358 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 SAMSN1Q9NSI8 373 aaKnown RBP15.24■□□□□ 0.03
LIMS1-205ENST00000410093 LRWD1Q9UFC0 647 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 KDM3AQ9Y4C1 1321 aa15.24■□□□□ 0.03
LIMS1-205ENST00000410093 RRP9O43818 475 aaKnown RBP15.23■□□□□ 0.03
LIMS1-205ENST00000410093 VIL1P09327 827 aaKnown RBP15.23■□□□□ 0.03
LIMS1-205ENST00000410093 ATP2B2Q01814 1243 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 PSMD2Q13200 908 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 KRT79Q5XKE5 535 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 KLHL10Q6JEL2 608 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 SV2BQ7L1I2 683 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
LIMS1-205ENST00000410093 CNGA4Q8IV77 575 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
LIMS1-205ENST00000410093 OGFOD1Q8N543 542 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 NELFBQ8WX92 580 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 COA7Q96BR5 231 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 IQCDQ96DY2 449 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 CDK5RAP3Q96JB5 506 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 BAG1Q99933 345 aaPredicted RBP15.23■□□□□ 0.03
LIMS1-205ENST00000410093 AMNQ9BXJ7 453 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 NT5C3AQ9H0P0 336 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 BLZF1Q9H2G9 400 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 INTS13Q9NVM9 706 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 CTNND2Q9UQB3 1225 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 SCN4AP35499 1836 aa15.23■□□□□ 0.03
LIMS1-205ENST00000410093 CYP3A7-CYP3A51PA0A087WV96 503 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 AKR1B15C9JRZ8 316 aaPredicted RBP15.22■□□□□ 0.03
LIMS1-205ENST00000410093 TBX3O15119 743 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 CTIFO43310 598 aaKnown RBP15.22■□□□□ 0.03
LIMS1-205ENST00000410093 TBC1D12O60347 775 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms