RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ZNF215Q9UL58 517 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 WDR64B1ANS9 1081 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 SCHIP1Q9P0W5 487 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 XPOTO43592 962 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 GNA14O95837 355 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 MUM1Q2TAK8 710 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 RWDD4Q6NW29 188 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 USP26Q9BXU7 913 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 BCAP29Q9UHQ4 241 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 RNF8O76064 485 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 CTSWP56202 376 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 FRA10AC1Q70Z53 315 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 NEUROG2Q9H2A3 272 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 TROVE2P10155 538 aaKnown RBP eCLIP12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 CCDC157Q569K6 752 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 ESRRBO95718 433 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 PYGLP06737 847 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 MAIP1Q8WWC4 291 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 NRBP2Q9NSY0 501 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 CLCA2Q9UQC9 943 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 NDUFAB1O14561 156 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 GIGYF1O75420 1035 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 FAM149B1Q96BN6 582 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 IFIH1Q9BYX4 1025 aaKnown RBP12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 SRGAP2CP0DJJ0 459 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 STX2P32856 288 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 FAM180AQ6UWF9 173 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 LZICQ8WZA0 190 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 KCNK3O14649 394 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 BUB1O43683 1085 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 C8orf34Q49A92 452 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 NT5C3AQ9H0P0 336 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 DPYSL4O14531 572 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 SEC24BO95487 1268 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 APOEP02649 317 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 GCKRQ14397 625 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 MYO5CQ9NQX4 1742 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 RGS16O15492 202 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 TTC4O95801 387 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 GOLGA8HP0CJ92 632 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 WDR62O43379 1518 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 MAPKBP1O60336 1514 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 RAD17O75943 681 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 ICA1Q05084 483 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 PLA2G4DQ86XP0 818 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 APPBP2Q92624 585 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 PCDHA1Q9Y5I3 950 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 POLR3AO14802 1390 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 ZNF202O95125 648 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 GYG1P46976 350 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 ADGBQ8N7X0 1667 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 GRK7Q8WTQ7 553 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 EXT2Q93063 718 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 ZBTB40Q9NUA8 1239 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 SLAIN2Q9P270 581 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 TEKT2Q9UIF3 430 aa12.24□□□□□ -0.45
PRPF40A-202ENST00000410080 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 NSUN2Q08J23 767 aaKnown RBP eCLIP12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 PPWD1Q96BP3 646 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 SNX14Q9Y5W7 946 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 TFAMQ00059 246 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 TACO1Q9BSH4 297 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 NUP160Q12769 1436 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 ACTN1P12814 892 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 IL13P35225 146 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 DYNLT1P63172 113 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.23□□□□□ -0.456e-17■■□□□ 11.9
PRPF40A-202ENST00000410080 ZNF577Q9BSK1 485 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 BCAMP50895 628 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 THOC5Q13769 683 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 AFG1LQ8WV93 481 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 SNX19Q92543 992 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 H3BRJ5 948 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 KRIT1O00522 736 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 BLVRAP53004 296 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 CYP4A11Q02928 519 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 ACCSLQ4AC99 568 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 MIGA2Q7L4E1 593 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 TRIM59Q8IWR1 403 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 TMCO5AQ8N6Q1 288 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 KCTD6Q8NC69 237 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 MIS12Q9H081 205 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 POC1B-GALNT4F8VUJ3 575 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 ATP2B4P23634 1241 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 LRCH2Q5VUJ6 765 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 KRT26Q7Z3Y9 468 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 MAP10Q9P2G4 905 aa12.23□□□□□ -0.45
PRPF40A-202ENST00000410080 RASSF2P50749 326 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 BFSP1Q12934 665 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 RPGRIP1Q96KN7 1286 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 ATP7AQ04656 1500 aa12.22□□□□□ -0.45
PRPF40A-202ENST00000410080 TMEM232C9JQI7 657 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms