RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
CCDC148-203ENST00000409889 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
CCDC148-203ENST00000409889 TGS1Q96RS0 853 aaKnown RBP12.66□□□□□ -0.38
CCDC148-203ENST00000409889 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
CCDC148-203ENST00000409889 MYL3P08590 195 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 ERVK-21P61565 698 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 BFSP2Q13515 415 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 KIAA1211Q6ZU35 1233 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 AACSQ86V21 672 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 PRSS33Q8NF86 280 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 PPP1R13LQ8WUF5 828 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 FEM1BQ9UK73 627 aa12.65□□□□□ -0.38
CCDC148-203ENST00000409889 TECTAO75443 2155 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 NLRC5Q86WI3 1866 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 KMT2EQ8IZD2 1858 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 ZFHX2Q9C0A1 2572 aaPredicted RBP12.64□□□□□ -0.39
CCDC148-203ENST00000409889 LINC01553A4QN01 128 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 HAX1O00165 279 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 GOLIM4O00461 696 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 GJB5O95377 273 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 CPT1AP50416 773 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 NBPF20Q3BBV1 942 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 SLFNL1Q499Z3 407 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 CLUAP1Q96AJ1 413 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 DNAJC2Q99543 621 aaKnown RBP12.64□□□□□ -0.39
CCDC148-203ENST00000409889 RAD9AQ99638 391 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 MTG1Q9BT17 334 aaPredicted RBP12.64□□□□□ -0.39
CCDC148-203ENST00000409889 VTA1Q9NP79 307 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
CCDC148-203ENST00000409889 PRKAG3Q9UGI9 489 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 FAM50BQ9Y247 325 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 ATG2AQ2TAZ0 1938 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 DCHS1Q96JQ0 3298 aa12.64□□□□□ -0.39
CCDC148-203ENST00000409889 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 IRS1P35568 1242 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC148-203ENST00000409889 PTPN5P54829 565 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 FOXK2Q01167 660 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
CCDC148-203ENST00000409889 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 NFRKBQ6P4R8 1299 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 CTR9Q6PD62 1173 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 ADHFE1Q8IWW8 467 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 CRBNQ96SW2 442 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 NOD1Q9Y239 953 aa12.63□□□□□ -0.39
CCDC148-203ENST00000409889 MICAL3Q7RTP6 2002 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
CCDC148-203ENST00000409889 RASA1P20936 1047 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 ADD2P35612 726 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 CNKSR3Q6P9H4 555 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 EP400NLQ6ZTU2 488 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 STK11IPQ8N1F8 1099 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 CCDC155Q8N6L0 562 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 OR6J1Q8NGC5 347 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 FRAT1Q92837 279 aaPredicted RBP12.62□□□□□ -0.39
CCDC148-203ENST00000409889 MRPL38Q96DV4 380 aaKnown RBP12.62□□□□□ -0.39
CCDC148-203ENST00000409889 TRERF1Q96PN7 1200 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 C17orf80Q9BSJ5 609 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 UPF3BQ9BZI7 483 aaKnown RBP12.62□□□□□ -0.39
CCDC148-203ENST00000409889 ARPP21Q9UBL0 812 aaPredicted RBP12.62□□□□□ -0.39
CCDC148-203ENST00000409889 MUTYHQ9UIF7 546 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 SLC4A4Q9Y6R1 1079 aa12.62□□□□□ -0.39
CCDC148-203ENST00000409889 FDX1P10109 184 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 ALAS1P13196 640 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 STAT2P52630 851 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 PTPN11Q06124 597 aaPredicted RBP12.61□□□□□ -0.39
CCDC148-203ENST00000409889 TIGD5Q53EQ6 642 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 IER5LQ5T953 404 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 FAM117BQ6P1L5 589 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 LRRC47Q8N1G4 583 aaKnown RBP12.61□□□□□ -0.39
CCDC148-203ENST00000409889 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 AFAP1L1Q8TED9 768 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 PABPC5Q96DU9 382 aaKnown RBP12.61□□□□□ -0.39
CCDC148-203ENST00000409889 WDR11Q9BZH6 1224 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 CYP39A1Q9NYL5 469 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 CTNNA3Q9UI47 895 aa12.61□□□□□ -0.39
CCDC148-203ENST00000409889 ISY1Q9ULR0 285 aaKnown RBP12.61□□□□□ -0.39
CCDC148-203ENST00000409889 VPS13AQ96RL7 3174 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 RALGAPA2Q2PPJ7 1873 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 TMEM232C9JQI7 657 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 GFRA3O60609 400 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 BMP3P12645 472 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 GPNMBQ14956 572 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 PTPROQ16827 1216 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 BRDTQ58F21 947 aaPredicted RBP12.6□□□□□ -0.39
CCDC148-203ENST00000409889 HERC4Q5GLZ8 1057 aaPredicted RBP12.6□□□□□ -0.39
CCDC148-203ENST00000409889 MUM1L1Q5H9M0 696 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 LRRC8DQ7L1W4 858 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 ERC1Q8IUD2 1116 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 RPAP2Q8IXW5 612 aaPredicted RBP12.6□□□□□ -0.39
CCDC148-203ENST00000409889 GMCL1P1Q8NEA9 526 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms