RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 U2AF1L4Q8WU68 220 aaKnown RBP16.22■□□□□ 0.19
GYPC-203ENST00000409836 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
GYPC-203ENST00000409836 ZNF274Q96GC6 653 aaPredicted RBP16.22■□□□□ 0.19
GYPC-203ENST00000409836 OGDHLQ9ULD0 1010 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 ASB14A6NK59 587 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 hCG_1984214I3L0E3 225 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 SEPT4O43236 478 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 SGPL1O95470 568 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 SNAI1O95863 264 aaPredicted RBP16.21■□□□□ 0.19
GYPC-203ENST00000409836 ZNF865P0CJ78 1059 aaPredicted RBP16.21■□□□□ 0.19
GYPC-203ENST00000409836 CCND3P30281 292 aaPredicted RBP16.21■□□□□ 0.19
GYPC-203ENST00000409836 METAP2P50579 478 aaKnown RBP eCLIP16.21■□□□□ 0.193e-7■■□□□ 14.3
GYPC-203ENST00000409836 SOX10P56693 466 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.19
GYPC-203ENST00000409836 LHX8Q68G74 356 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 NSMFQ6X4W1 530 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 RNF207Q6ZRF8 634 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 ARMCX2Q7L311 632 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 ZNF713Q8N859 430 aaPredicted RBP16.21■□□□□ 0.19
GYPC-203ENST00000409836 ANKLE1Q8NAG6 615 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 ADD3Q9UEY8 706 aaKnown RBP16.21■□□□□ 0.19
GYPC-203ENST00000409836 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
GYPC-203ENST00000409836 PIK3CDO00329 1044 aa16.2■□□□□ 0.18
GYPC-203ENST00000409836 PDIA3P30101 505 aaKnown RBP16.2■□□□□ 0.18
GYPC-203ENST00000409836 ALDH5A1P51649 535 aaPredicted RBP16.2■□□□□ 0.18
GYPC-203ENST00000409836 FGD1P98174 961 aa16.2■□□□□ 0.18
GYPC-203ENST00000409836 NTRK3Q16288 839 aa16.2■□□□□ 0.18
GYPC-203ENST00000409836 PPP1R18Q6NYC8 613 aa16.2■□□□□ 0.18
GYPC-203ENST00000409836 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
GYPC-203ENST00000409836 SYTL5Q8TDW5 730 aaPredicted RBP16.2■□□□□ 0.18
GYPC-203ENST00000409836 KIF2CQ99661 725 aa16.2■□□□□ 0.18
GYPC-203ENST00000409836 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
GYPC-203ENST00000409836 PDRG1Q9NUG6 133 aa16.2■□□□□ 0.18
GYPC-203ENST00000409836 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.2■□□□□ 0.18
GYPC-203ENST00000409836 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
GYPC-203ENST00000409836 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
GYPC-203ENST00000409836 DDX20Q9UHI6 824 aaKnown RBP16.2■□□□□ 0.18
GYPC-203ENST00000409836 TNRC18O15417 2968 aaPredicted RBP16.2■□□□□ 0.18
GYPC-203ENST00000409836 ALPK3Q96L96 1907 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 NKX3-2P78367 333 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 ANKRD1Q15327 319 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 DEFB118Q96PH6 123 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 COL20A1Q9P218 1284 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 CNPY2Q9Y2B0 182 aa16.19■□□□□ 0.18
GYPC-203ENST00000409836 PTPDC1A2A3K4 754 aa16.18■□□□□ 0.18
GYPC-203ENST00000409836 IFNAR1P17181 557 aa16.18■□□□□ 0.18
GYPC-203ENST00000409836 RAB11FIP4Q86YS3 637 aa16.18■□□□□ 0.18
GYPC-203ENST00000409836 RNF26Q9BY78 433 aaPredicted RBP16.18■□□□□ 0.18
GYPC-203ENST00000409836 VTA1Q9NP79 307 aa16.18■□□□□ 0.18
GYPC-203ENST00000409836 AKR1A1P14550 325 aa16.17■□□□□ 0.18
GYPC-203ENST00000409836 EN2P19622 333 aaPredicted RBP16.17■□□□□ 0.18
GYPC-203ENST00000409836 MNX1P50219 401 aaPredicted RBP16.17■□□□□ 0.18
GYPC-203ENST00000409836 CMTR1Q8N1G2 835 aaKnown RBP16.17■□□□□ 0.18
GYPC-203ENST00000409836 IWS1Q96ST2 819 aa16.17■□□□□ 0.18
GYPC-203ENST00000409836 RBM47A0AV96 593 aaKnown RBP16.16■□□□□ 0.18
GYPC-203ENST00000409836 ESYT2A0FGR8 921 aa16.16■□□□□ 0.18
GYPC-203ENST00000409836 ADD1P35611 737 aaKnown RBP16.16■□□□□ 0.18
GYPC-203ENST00000409836 ACVR2BQ13705 512 aa16.16■□□□□ 0.18
GYPC-203ENST00000409836 FAM177A1Q8N128 213 aaPredicted RBP16.16■□□□□ 0.18
GYPC-203ENST00000409836 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
GYPC-203ENST00000409836 BARHL2Q9NY43 387 aa16.16■□□□□ 0.18
GYPC-203ENST00000409836 MEIS2O14770 477 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 PRPF3O43395 683 aaKnown RBP16.15■□□□□ 0.18
GYPC-203ENST00000409836 COL6A1P12109 1028 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 CALML3P27482 149 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
GYPC-203ENST00000409836 AK2P54819 239 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 PFKFB3Q16875 520 aaPredicted RBP16.15■□□□□ 0.18
GYPC-203ENST00000409836 WWC2Q6AWC2 1192 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 TBC1D5Q92609 795 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 TBC1D32Q96NH3 1257 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
GYPC-203ENST00000409836 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
GYPC-203ENST00000409836 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 UPF3AQ9H1J1 476 aaKnown RBP16.15■□□□□ 0.18
GYPC-203ENST00000409836 PXMP2Q9NR77 195 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 TPCN1Q9ULQ1 816 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 STK36Q9NRP7 1315 aa16.15■□□□□ 0.18
GYPC-203ENST00000409836 B4DLN1 442 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 GCOM1H8Y6P7 765 aaPredicted RBP16.14■□□□□ 0.17
GYPC-203ENST00000409836 STXBP3O00186 592 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 DNM1LO00429 736 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 ADCY6O43306 1168 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 PFKFB2O60825 505 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 ADAMTS4O75173 837 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 CFBP00751 764 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 MYCP01106 439 aaPredicted RBP16.14■□□□□ 0.17
GYPC-203ENST00000409836 POLR2MP0CAP2 368 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 MRPL12P52815 198 aaKnown RBP16.14■□□□□ 0.17
GYPC-203ENST00000409836 PKN1Q16512 942 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 PRAMEF19Q5SWL8 479 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 TYW1BQ6NUM6 668 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 TAPT1Q6NXT6 567 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 PDCD2LQ9BRP1 358 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms