RNA–Protein interactions for RNA: ENST00000409687.4

SAPCD2-201, Transcript of suppressor APC domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAPCD2, Length 3,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD2-201ENST00000409687 KRT12Q99456 494 aa16.65■□□□□ 0.26
SAPCD2-201ENST00000409687 PLEKP08567 350 aaPredicted RBP16.65■□□□□ 0.26
SAPCD2-201ENST00000409687 MRPL12P52815 198 aaKnown RBP16.65■□□□□ 0.26
SAPCD2-201ENST00000409687 STK4Q13043 487 aa16.65■□□□□ 0.26
SAPCD2-201ENST00000409687 TXNRD3Q86VQ6 643 aa16.65■□□□□ 0.26
SAPCD2-201ENST00000409687 CCDC65Q8IXS2 484 aa16.65■□□□□ 0.26
SAPCD2-201ENST00000409687 RRP15Q9Y3B9 282 aaKnown RBP16.65■□□□□ 0.26
SAPCD2-201ENST00000409687 SASH3O75995 380 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 GCNT3O95395 438 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 C3orf67Q6ZVT6 689 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 STK36Q9NRP7 1315 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 OPA1O60313 960 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 CFBP00751 764 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 SFMBT2Q5VUG0 894 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 LRP10Q7Z4F1 713 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 CEP57Q86XR8 500 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 FAM133AQ8N9E0 248 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L5A8MUK1 530 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 CLIC2O15247 247 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 NEFHP12036 1026 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 ACTN2P35609 894 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 GTF2A1P52655 376 aaPredicted RBP16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 ERVK-24P63145 666 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 DPYDQ12882 1025 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 ITPK1Q13572 414 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 ALX1Q15699 326 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 TMEM132AQ24JP5 1023 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 MYOCDQ8IZQ8 938 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 TBC1D5Q92609 795 aa16.64■□□□□ 0.25
SAPCD2-201ENST00000409687 CETN3O15182 167 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 TDP2O95551 362 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 GFPT1Q06210 699 aaPredicted RBP16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 NUP58Q9BVL2 599 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 EPB41L5Q9HCM4 733 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 FAM13AO94988 1023 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 H2AFXP16104 143 aaPredicted RBP16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 DNAAF5Q86Y56 855 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 ZNF579Q8NAF0 562 aaKnown RBP16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 SLC4A9Q96Q91 983 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 VEZTQ9HBM0 779 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 ATP2C1P98194 919 aaPredicted RBP16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 TROAPQ12815 778 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 ASIC2Q16515 512 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 FAM26FQ5R3K3 315 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 ANKRD40Q6AI12 368 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 MRRFQ96E11 262 aaKnown RBP16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 GOLPH3Q9H4A6 298 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 USP40Q9NVE5 1235 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 HYOU1Q9Y4L1 999 aa16.63■□□□□ 0.25
SAPCD2-201ENST00000409687 XDHP47989 1333 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 CDHR2Q9BYE9 1310 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 CYP2J2P51589 502 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 KIF11P52732 1056 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 CEP85LQ5SZL2 805 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 PANK4Q9NVE7 773 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 PPP1R3GB7ZBB8 358 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 MSL1Q68DK7 614 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 CCDC84Q86UT8 332 aaPredicted RBP16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 TPH2Q8IWU9 490 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 TRIM58Q8NG06 486 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 PSTPIP2Q9H939 334 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 GGCXP38435 758 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 ADAM9Q13443 819 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 USP17L6PQ6QN14 398 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 DAAM2Q86T65 1068 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 PAIP2Q9BPZ3 127 aaKnown RBP16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 NDST4Q9H3R1 872 aa16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 DDX25Q9UHL0 483 aaKnown RBP16.62■□□□□ 0.25
SAPCD2-201ENST00000409687 SORBS3O60504 671 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 FAM196AQ6ZSG2 479 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 U2AF1L4Q8WU68 220 aaKnown RBP16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 CEP95Q96GE4 821 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 MS4A14Q96JA4 679 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 LGALS16A8MUM7 142 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 MYO1CO00159 1063 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 CCNE1P24864 410 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 PMS1P54277 932 aaKnown RBP16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 E2F4Q16254 413 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 CFAP221Q4G0U5 840 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 RBM26Q5T8P6 1007 aaKnown RBP16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 AP1M1Q9BXS5 423 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 HOMER2Q9NSB8 354 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 H3BQF6 201 aa16.61■□□□□ 0.25
SAPCD2-201ENST00000409687 CDK8P49336 464 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms