RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 TBX2Q13207 712 aaPredicted RBP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 CEP85LQ5SZL2 805 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 MSANTD4Q8NCY6 345 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 RASGRP4Q8TDF6 673 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 RBM17Q96I25 401 aaKnown RBP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 TANGO6Q9C0B7 1094 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 ODF2LQ9ULJ1 636 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 XDHP47989 1333 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 TTC26A0AVF1 554 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 KRT86O43790 486 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 PTPAQ15257 358 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 TDRD12Q587J7 1177 aaKnown RBP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 TYW1BQ6NUM6 668 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 TEX11Q8IYF3 940 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 FANCBQ8NB91 859 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 CCDC43Q96MW1 224 aaKnown RBP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 PANX2Q96RD6 677 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 BAIAP2L1Q9UHR4 511 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 AKR1B10O60218 316 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 KLK7P49862 253 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 SF3B2Q13435 895 aaKnown RBP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 SPA17Q15506 151 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 ZSCAN29Q8IWY8 852 aaPredicted RBP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 HNRNPLLQ8WVV9 542 aaKnown RBP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 NELFBQ8WX92 580 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 TMX4Q9H1E5 349 aaPredicted RBP14.41□□□□□ -0.1
PTPRN-202ENST00000409251 ZMYM6O95789 1325 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 SALL1Q9NSC2 1324 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 KCNJ18B7U540 433 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 MPHOSPH10O00566 681 aaKnown RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 RXRBP28702 533 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 KIF5AQ12840 1032 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 KCNJ12Q14500 433 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 CFAP58Q5T655 872 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 ZSCAN10Q96SZ4 725 aaPredicted RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 LACRTQ9GZZ8 138 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 RNF41Q9H4P4 317 aaPredicted RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 RAB21Q9UL25 225 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 MYBL1P10243 752 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 GNAT2P19087 354 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 MTIF2P46199 727 aaKnown RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 NNTQ13423 1086 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 KCNV1Q6PIU1 500 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 KLHL7Q8IXQ5 586 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 TBC1D16Q8TBP0 767 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 TMEM87BQ96K49 555 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 TACO1Q9BSH4 297 aaKnown RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 AGXT2Q9BYV1 514 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 MLXIPQ9HAP2 919 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 FAM207AQ9NSI2 230 aaPredicted RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 TRIM75PA6NK02 468 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 PDE2AO00408 941 aaPredicted RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 POLRMTO00411 1230 aaKnown RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 NFRKBQ6P4R8 1299 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 CATIPQ7Z7H3 387 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 PNMA8AQ86V59 439 aaPredicted RBP14.4□□□□□ -0.1
PTPRN-202ENST00000409251 IQUBQ8NA54 791 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 CNNM2Q9H8M5 875 aa14.4□□□□□ -0.1
PTPRN-202ENST00000409251 A0A1B0GTH6 734 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 B4DLN1 442 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 TSPY3P0CV98 308 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 TSPY8P0CW00 308 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 COPB1P53618 953 aaKnown RBP14.39□□□□□ -0.11
PTPRN-202ENST00000409251 PPFIA1Q13136 1202 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 MORC3Q14149 939 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 DPP8Q6V1X1 898 aaPredicted RBP14.39□□□□□ -0.11
PTPRN-202ENST00000409251 ZNF444Q8N0Y2 327 aaPredicted RBP14.39□□□□□ -0.11
PTPRN-202ENST00000409251 CTAGE1Q96RT6 745 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 CCDC113Q9H0I3 377 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 ADD3Q9UEY8 706 aaKnown RBP14.39□□□□□ -0.11
PTPRN-202ENST00000409251 PPEF1O14829 653 aaPredicted RBP14.39□□□□□ -0.11
PTPRN-202ENST00000409251 PPP6R2O75170 966 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 MOCS3O95396 460 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 PAX7P23759 505 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 CCDC42Q96M95 316 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 MMRN2Q9H8L6 949 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 LRWD1Q9UFC0 647 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 NFU1Q9UMS0 254 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 HPSEQ9Y251 543 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 PDHBP11177 359 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 C8orf74Q6P047 294 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 CCDC121Q6ZUS5 278 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 TAX1BP1Q86VP1 789 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 STAG2Q8N3U4 1231 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 MS4A14Q96JA4 679 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 AGPAT5Q9NUQ2 364 aa14.39□□□□□ -0.11
PTPRN-202ENST00000409251 GOLGA6L10A6NI86 522 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 CLGNO14967 610 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 PAFAH1B1P43034 410 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 GUCY2DQ02846 1103 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 DPYDQ12882 1025 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 A0A087X0B3 334 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 ZNF18P17022 549 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 TMC4Q7Z404 712 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 OR8K1Q8NGG5 319 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 OR2W6PQ8NHA6 318 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 STAG1Q8WVM7 1258 aa14.38□□□□□ -0.11
PTPRN-202ENST00000409251 TRIM31Q9BZY9 425 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms