RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 RGS22Q8NE09 1264 aa24.05■■□□□ 1.44
C4orf48-201ENST00000409248 OGDHLQ9ULD0 1010 aa24.05■■□□□ 1.44
C4orf48-201ENST00000409248 LOC102724159A0A0B4J2E5 919 aa24.04■■□□□ 1.44
C4orf48-201ENST00000409248 CYTH3O43739 400 aa24.04■■□□□ 1.44
C4orf48-201ENST00000409248 RXRAP19793 462 aa24.04■■□□□ 1.44
C4orf48-201ENST00000409248 METAP2P50579 478 aaKnown RBP eCLIP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 PWP2Q15269 919 aaKnown RBP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 SLC30A10Q6XR72 485 aa24.04■■□□□ 1.44
C4orf48-201ENST00000409248 NOL8Q76FK4 1167 aaKnown RBP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 FANCBQ8NB91 859 aa24.04■■□□□ 1.44
C4orf48-201ENST00000409248 RRP36Q96EU6 259 aaKnown RBP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 ZNF274Q96GC6 653 aaPredicted RBP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 PIGSQ96S52 555 aa24.04■■□□□ 1.44
C4orf48-201ENST00000409248 LARP6Q9BRS8 491 aaKnown RBP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 RBM28Q9NW13 759 aaKnown RBP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 SEC63Q9UGP8 760 aaKnown RBP24.04■■□□□ 1.44
C4orf48-201ENST00000409248 BAZ2BQ9UIF8 2168 aaKnown RBP24.03■■□□□ 1.44
C4orf48-201ENST00000409248 PNMA6FA0A0J9YX94 578 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 SOWAHBA6NEL2 793 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 CALML3P27482 149 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 RPS6P62753 249 aaKnown RBP24.03■■□□□ 1.44
C4orf48-201ENST00000409248 RTN1Q16799 776 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 SLC35G1Q2M3R5 365 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 PRAMEF19Q5SWL8 479 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 LHX8Q68G74 356 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 CCDC144CPQ8IYA2 1237 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 MPHOSPH6Q99547 160 aaKnown RBP24.03■■□□□ 1.44
C4orf48-201ENST00000409248 ABHD16BQ9H3Z7 469 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 ZHX1Q9UKY1 873 aaPredicted RBP24.03■■□□□ 1.44
C4orf48-201ENST00000409248 PCDHA1Q9Y5I3 950 aa24.03■■□□□ 1.44
C4orf48-201ENST00000409248 PLEKHA8P1O95397 391 aa24.02■■□□□ 1.44
C4orf48-201ENST00000409248 AKR1A1P14550 325 aa24.02■■□□□ 1.44
C4orf48-201ENST00000409248 PDIA3P30101 505 aaKnown RBP24.02■■□□□ 1.44
C4orf48-201ENST00000409248 PPP2R5BQ15173 497 aa24.02■■□□□ 1.44
C4orf48-201ENST00000409248 TMTC3Q6ZXV5 915 aa24.02■■□□□ 1.44
C4orf48-201ENST00000409248 TPCN1Q9ULQ1 816 aa24.02■■□□□ 1.44
C4orf48-201ENST00000409248 CCDC196A0A1B0GTZ2 297 aa24.01■■□□□ 1.43
C4orf48-201ENST00000409248 SNAI1O95863 264 aaPredicted RBP24.01■■□□□ 1.43
C4orf48-201ENST00000409248 ZNF865P0CJ78 1059 aaPredicted RBP24.01■■□□□ 1.43
C4orf48-201ENST00000409248 MCM2P49736 904 aa24.01■■□□□ 1.43
C4orf48-201ENST00000409248 UBE2Q1Q7Z7E8 422 aa24.01■■□□□ 1.43
C4orf48-201ENST00000409248 LIMCH1Q9UPQ0 1083 aa24.01■■□□□ 1.43
C4orf48-201ENST00000409248 NID2Q14112 1375 aa24.01■■□□□ 1.43
C4orf48-201ENST00000409248 B4DLN1 442 aa24■■□□□ 1.43
C4orf48-201ENST00000409248 PPP1R11O60927 126 aaPredicted RBP24■■□□□ 1.43
C4orf48-201ENST00000409248 RARBP10826 455 aa24■■□□□ 1.43
C4orf48-201ENST00000409248 ALDH5A1P51649 535 aaPredicted RBP24■■□□□ 1.43
C4orf48-201ENST00000409248 MRPL12P52815 198 aaKnown RBP24■■□□□ 1.43
C4orf48-201ENST00000409248 ACVR2BQ13705 512 aa24■■□□□ 1.43
C4orf48-201ENST00000409248 DNERQ8NFT8 737 aa24■■□□□ 1.43
C4orf48-201ENST00000409248 SLKQ9H2G2 1235 aaPredicted RBP24■■□□□ 1.43
C4orf48-201ENST00000409248 ASTN1O14525 1302 aa24■■□□□ 1.43
C4orf48-201ENST00000409248 STK3Q13188 491 aa23.99■■□□□ 1.43
C4orf48-201ENST00000409248 NECAB2Q7Z6G3 386 aa23.99■■□□□ 1.43
C4orf48-201ENST00000409248 SRBD1Q8N5C6 995 aaKnown RBP23.99■■□□□ 1.43
C4orf48-201ENST00000409248 SAMD3Q8N6K7 520 aa23.99■■□□□ 1.43
C4orf48-201ENST00000409248 PIBF1Q8WXW3 757 aa23.99■■□□□ 1.43
C4orf48-201ENST00000409248 ZSCAN31Q96LW9 406 aaPredicted RBP23.99■■□□□ 1.43
C4orf48-201ENST00000409248 FAM184BQ9ULE4 1060 aa23.99■■□□□ 1.43
C4orf48-201ENST00000409248 CCT2P78371 535 aaKnown RBP23.98■■□□□ 1.43
C4orf48-201ENST00000409248 MORC4Q8TE76 937 aa23.98■■□□□ 1.43
C4orf48-201ENST00000409248 HTATIP2Q9BUP3 242 aa23.98■■□□□ 1.43
C4orf48-201ENST00000409248 MAP3K20Q9NYL2 800 aaKnown RBP23.98■■□□□ 1.43
C4orf48-201ENST00000409248 PFKFB2O60825 505 aa23.97■■□□□ 1.43
C4orf48-201ENST00000409248 CFBP00751 764 aa23.97■■□□□ 1.43
C4orf48-201ENST00000409248 GHRHRQ02643 423 aa23.97■■□□□ 1.43
C4orf48-201ENST00000409248 ME3Q16798 604 aa23.97■■□□□ 1.43
C4orf48-201ENST00000409248 ANO1Q5XXA6 986 aa23.97■■□□□ 1.43
C4orf48-201ENST00000409248 ARRDC4Q8NCT1 418 aa23.97■■□□□ 1.43
C4orf48-201ENST00000409248 PURBQ96QR8 312 aaKnown RBP23.97■■□□□ 1.43
C4orf48-201ENST00000409248 VTA1Q9NP79 307 aa23.97■■□□□ 1.43
C4orf48-201ENST00000409248 SH2B1Q9NRF2 756 aaPredicted RBP23.97■■□□□ 1.43
C4orf48-201ENST00000409248 CNTNAP5Q8WYK1 1306 aa23.96■■□□□ 1.43
C4orf48-201ENST00000409248 DNM1LO00429 736 aa23.96■■□□□ 1.43
C4orf48-201ENST00000409248 CDC27P30260 824 aa23.96■■□□□ 1.43
C4orf48-201ENST00000409248 HSD17B4P51659 736 aa23.96■■□□□ 1.43
C4orf48-201ENST00000409248 CPLX2Q6PUV4 134 aaKnown RBP23.96■■□□□ 1.43
C4orf48-201ENST00000409248 CMTR1Q8N1G2 835 aaKnown RBP23.96■■□□□ 1.43
C4orf48-201ENST00000409248 SYTL5Q8TDW5 730 aaPredicted RBP23.96■■□□□ 1.43
C4orf48-201ENST00000409248 DIS3LQ8TF46 1054 aaKnown RBP23.96■■□□□ 1.43
C4orf48-201ENST00000409248 PAWRQ96IZ0 340 aaKnown RBP23.96■■□□□ 1.43
C4orf48-201ENST00000409248 KATNBL1Q9H079 304 aa23.96■■□□□ 1.43
C4orf48-201ENST00000409248 XPNPEP3Q9NQH7 507 aa23.96■■□□□ 1.43
C4orf48-201ENST00000409248 FAM217BQ9NTX9 383 aaPredicted RBP23.96■■□□□ 1.43
C4orf48-201ENST00000409248 KBTBD13C9JR72 458 aa23.95■■□□□ 1.42
C4orf48-201ENST00000409248 CPLX1O14810 134 aa23.95■■□□□ 1.42
C4orf48-201ENST00000409248 OPLAHO14841 1288 aa23.95■■□□□ 1.42
C4orf48-201ENST00000409248 CD2BP2O95400 341 aaKnown RBP23.95■■□□□ 1.42
C4orf48-201ENST00000409248 ADD1P35611 737 aaKnown RBP23.95■■□□□ 1.42
C4orf48-201ENST00000409248 PDE4DQ08499 809 aa23.95■■□□□ 1.42
C4orf48-201ENST00000409248 CCDC144BQ3MJ40 725 aa23.95■■□□□ 1.42
C4orf48-201ENST00000409248 CCDC82Q8N4S0 544 aa23.95■■□□□ 1.42
C4orf48-201ENST00000409248 NSUN6Q8TEA1 469 aaKnown RBP23.95■■□□□ 1.42
C4orf48-201ENST00000409248 C11orf49Q9H6J7 331 aa23.95■■□□□ 1.42
C4orf48-201ENST00000409248 NCOA5Q9HCD5 579 aaKnown RBP23.95■■□□□ 1.42
C4orf48-201ENST00000409248 PDE4DIPQ5VU43 2346 aa23.94■■□□□ 1.42
C4orf48-201ENST00000409248 LARGE1O95461 756 aa23.94■■□□□ 1.42
C4orf48-201ENST00000409248 MNX1P50219 401 aaPredicted RBP23.94■■□□□ 1.42
C4orf48-201ENST00000409248 SCRN1Q12765 414 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms