RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 ATICP31939 592 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 CATSPER1Q8NEC5 780 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 DCAF5Q96JK2 942 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 PTPREP23469 700 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 ATP8A2Q9NTI2 1148 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 FRMD3A2A2Y4 597 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 LPXNO60711 386 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 PSMD7P51665 324 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 ARHGAP44Q17R89 818 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 GNPTABQ3T906 1256 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 KRT40Q6A162 431 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 LRRC8BQ6P9F7 803 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 C17orf53Q8N3J3 647 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-203ENST00000409161 TMEM60Q9H2L4 133 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 IVNS1ABPQ9Y6Y0 642 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 NR1D1P20393 614 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 TBC1D22AQ8WUA7 517 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
SHANK2-203ENST00000409161 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 IQANK1A0A1B0GTG1 560 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 SYCE1LA8MT33 242 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 FOXO3O43524 673 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 PPARGP37231 505 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-203ENST00000409161 CASP2P42575 452 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
SHANK2-203ENST00000409161 AK8Q96MA6 479 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 POLE2P56282 527 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 NLRX1Q86UT6 975 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 PA2G4Q9UQ80 394 aaKnown RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 MYO1FO00160 1098 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 HEXIM1O94992 359 aaKnown RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 NLRC4Q9NPP4 1024 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 ABCC12Q96J65 1359 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 TCHHQ07283 1943 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 BRD1O95696 1058 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 ZC3H18Q86VM9 953 aaKnown RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 C8orf58Q8NAV2 365 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 DEPTORQ8TB45 409 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 STOML1Q9UBI4 398 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 ECEL1O95672 775 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 PTK2Q05397 1052 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 FSCBQ5H9T9 825 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 TRIML2Q8N7C3 387 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 RUBCNQ92622 972 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 DHTKD1Q96HY7 919 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 FGD4Q96M96 766 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 KRT82Q9NSB4 513 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 FAM178BQ8IXR5 827 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 DONSONQ9NYP3 566 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 TBC1D7Q9P0N9 293 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 NVLO15381 856 aaKnown RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 IGBP1P78318 339 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 NEK8Q86SG6 692 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 CRLF3Q8IUI8 442 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 EXOC8Q8IYI6 725 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 SKA2Q8WVK7 121 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 NBPF3Q9H094 633 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 DIS3Q9Y2L1 958 aaKnown RBP13.17□□□□□ -0.3
SHANK2-203ENST00000409161 SERPINI2O75830 405 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 PFKFB1P16118 471 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 ADPGKQ9BRR6 497 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 ARHGAP26Q9UNA1 814 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
SHANK2-203ENST00000409161 EYA2O00167 538 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 ZBED4O75132 1171 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 VAMP4O75379 141 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 A0A1W2PQ27 194 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 A0A1W2PQ64 194 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 A0A1W2PQD8 194 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 LIG4P49917 911 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 IKBKBO14920 756 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 CHUKO15111 745 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 NFKBIAP25963 317 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 DESI2Q9BSY9 194 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 TRPA1O75762 1119 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 CHGBP05060 677 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 AP2B1P63010 937 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 BZW1Q7L1Q6 419 aaKnown RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 MAPKBP1O60336 1514 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 FLOT2Q14254 428 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 NUDCD3Q8IVD9 361 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 MAGOHBQ96A72 148 aaKnown RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms