RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 DYNC1LI2O43237 492 aaPredicted RBP22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 TRDNQ13061 729 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 IQSEC1Q6DN90 963 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 KIAA1211Q6ZU35 1233 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 SKAP1Q86WV1 359 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 VTI1AQ96AJ9 217 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 VAT1LQ9HCJ6 419 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 KIAA0355O15063 1070 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 QRICH1Q2TAL8 776 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 STOX1Q6ZVD7 989 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 TBC1D5Q92609 795 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 TOX2Q96NM4 488 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 JMJD4Q9H9V9 463 aa22.53■■□□□ 1.2
SMARCB1-204ENST00000407422 BAZ2BQ9UIF8 2168 aaKnown RBP22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 E7EWF7 191 aa22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 DHX16O60231 1041 aaKnown RBP22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 CDK7P50613 346 aa22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 FSCN1Q16658 493 aaKnown RBP22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 CXCL17Q6UXB2 119 aa22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 MAP4K1Q92918 833 aa22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 AP5M1Q9H0R1 490 aa22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 SENP2Q9HC62 589 aa22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 TMEM39AQ9NV64 488 aa22.52■■□□□ 1.2
SMARCB1-204ENST00000407422 DCDC2CA8MYV0 355 aa22.51■■□□□ 1.19
SMARCB1-204ENST00000407422 SHHQ15465 462 aa22.51■■□□□ 1.19
SMARCB1-204ENST00000407422 C9orf50Q5SZB4 431 aa22.51■■□□□ 1.19
SMARCB1-204ENST00000407422 CHST3Q7LGC8 479 aa22.51■■□□□ 1.19
SMARCB1-204ENST00000407422 LOC102724159A0A0B4J2E5 919 aa22.5■■□□□ 1.19
SMARCB1-204ENST00000407422 PWP2Q15269 919 aaKnown RBP22.5■■□□□ 1.19
SMARCB1-204ENST00000407422 RGS22Q8NE09 1264 aa22.5■■□□□ 1.19
SMARCB1-204ENST00000407422 WDR11Q9BZH6 1224 aa22.5■■□□□ 1.19
SMARCB1-204ENST00000407422 MAD2L2Q9UI95 211 aa22.5■■□□□ 1.19
SMARCB1-204ENST00000407422 ABCB11O95342 1321 aa22.5■■□□□ 1.19
SMARCB1-204ENST00000407422 A0A0U1RQG5 324 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 ARVCFO00192 962 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 IFIT3O14879 490 aaKnown RBP22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 RAG1P15918 1043 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 EDNRBP24530 442 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 DUSP28Q4G0W2 176 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 Q7L0L9 218 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 DNERQ8NFT8 737 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 RBM8AQ9Y5S9 174 aaKnown RBP22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 CDH23Q9H251 3354 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 KLRF2D3W0D1 207 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 EPHB4P54760 987 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 PDE4DQ08499 809 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 GPR153Q6NV75 609 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 RALYLQ86SE5 291 aaKnown RBP22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 FBXO11Q86XK2 927 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 NCOA7Q8NI08 942 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 COL20A1Q9P218 1284 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 Q9Y3F1 56 aa22.49■■□□□ 1.19
SMARCB1-204ENST00000407422 RBM47A0AV96 593 aaKnown RBP22.48■■□□□ 1.19
SMARCB1-204ENST00000407422 PALM3A6NDB9 673 aaPredicted RBP22.48■■□□□ 1.19
SMARCB1-204ENST00000407422 DEFB123Q8N688 67 aa22.48■■□□□ 1.19
SMARCB1-204ENST00000407422 TBX21Q9UL17 535 aa22.48■■□□□ 1.19
SMARCB1-204ENST00000407422 MROH7Q68CQ1 1323 aa22.48■■□□□ 1.19
SMARCB1-204ENST00000407422 ANTXR2P58335 489 aa22.47■■□□□ 1.19
SMARCB1-204ENST00000407422 SLC35G1Q2M3R5 365 aa22.47■■□□□ 1.19
SMARCB1-204ENST00000407422 FAM126BQ8IXS8 530 aa22.47■■□□□ 1.19
SMARCB1-204ENST00000407422 SYTL5Q8TDW5 730 aaPredicted RBP22.47■■□□□ 1.19
SMARCB1-204ENST00000407422 TAAR1Q96RJ0 339 aa22.47■■□□□ 1.19
SMARCB1-204ENST00000407422 GRIN2DO15399 1336 aa22.47■■□□□ 1.19
SMARCB1-204ENST00000407422 PPP1R11O60927 126 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 MTMR8Q96EF0 704 aa22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 LSG1Q9H089 658 aaKnown RBP22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 ERICH2A1L162 156 aa22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 PSMC6P62333 389 aa22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 GRM4Q14833 912 aa22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 WTAPQ15007 396 aa22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 MB21D2Q8IYB1 491 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 SLC43A3Q8NBI5 491 aa22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 MPHOSPH6Q99547 160 aaKnown RBP22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 ESYT1Q9BSJ8 1104 aa22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 MRPL11Q9Y3B7 192 aaKnown RBP22.46■■□□□ 1.19
SMARCB1-204ENST00000407422 OPLAHO14841 1288 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 ZEB2O60315 1214 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 CABYRO75952 493 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 TIMP1P01033 207 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 TROAPQ12815 778 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 ITGA7Q13683 1181 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 TMEM67Q5HYA8 995 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 CENPQQ7L2Z9 268 aaPredicted RBP22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 MCF2L2Q86YR7 1114 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 IGDCC4Q8TDY8 1250 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 COPS5Q92905 334 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 AMNQ9BXJ7 453 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 KIAA1217Q5T5P2 1943 aa22.45■■□□□ 1.18
SMARCB1-204ENST00000407422 ZBTB5O15062 677 aa22.44■■□□□ 1.18
SMARCB1-204ENST00000407422 CD4P01730 458 aa22.44■■□□□ 1.18
SMARCB1-204ENST00000407422 FPGSQ05932 587 aa22.44■■□□□ 1.18
SMARCB1-204ENST00000407422 COL9A3Q14050 684 aaPredicted RBP22.44■■□□□ 1.18
SMARCB1-204ENST00000407422 SART3Q15020 963 aaKnown RBP22.44■■□□□ 1.18
SMARCB1-204ENST00000407422 MAF1Q9H063 256 aa22.44■■□□□ 1.18
SMARCB1-204ENST00000407422 GPHNQ9NQX3 736 aaPredicted RBP22.44■■□□□ 1.18
SMARCB1-204ENST00000407422 EYSQ5T1H1 3165 aa22.43■■□□□ 1.18
SMARCB1-204ENST00000407422 ARIH2O95376 493 aa22.43■■□□□ 1.18
SMARCB1-204ENST00000407422 PPP2R5BQ15173 497 aa22.43■■□□□ 1.18
SMARCB1-204ENST00000407422 HOMER1Q86YM7 354 aa22.43■■□□□ 1.18
SMARCB1-204ENST00000407422 OR6J1Q8NGC5 347 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms