RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 LEMD3Q9Y2U8 911 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 H3BRJ5 948 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 MYO1BO43795 1136 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 SASH1O94885 1247 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 GSTT1P30711 240 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 CCT4P50991 539 aaKnown RBP8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 PRKG1Q13976 671 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 FAM117BQ6P1L5 589 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 DTHD1Q6ZMT9 781 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 KIAA0825Q8IV33 1275 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 ERO1AQ96HE7 468 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 FAM161BQ96MY7 647 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 MPHOSPH8Q99549 860 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 ANKRD2Q9GZV1 360 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 PHAXQ9H814 394 aaKnown RBP8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 SRA1Q9HD15 236 aaKnown RBP8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 ANGEL1Q9UNK9 670 aaKnown RBP8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 MINPP1Q9UNW1 487 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 SCAF8Q9UPN6 1271 aaKnown RBP8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 TRIM17Q9Y577 477 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 PPP2R3BQ9Y5P8 575 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 ANKRD36CQ5JPF3 1778 aa8.58□□□□□ -1.04
CEACAM1-208ENST00000403461 A0A0A0MRY4 1105 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 C1QTNF9BB2RNN3 333 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 LINC01387J3KSC0 135 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 ELL2O00472 640 aaPredicted RBP8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 SORBS3O60504 671 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 ZBTB48P10074 688 aaPredicted RBP8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 RAC1P63000 192 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 ARHGEF6Q15052 776 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 DLGAP5Q15398 846 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 RPS26P11Q5JNZ5 115 aaPredicted RBP8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 TTLL5Q6EMB2 1281 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 MAP4K3Q8IVH8 894 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 JARID2Q92833 1246 aaPredicted RBP8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 CLEC4MQ9H2X3 399 aaPredicted RBP8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 MRS2Q9HD23 443 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 MAP3K2Q9Y2U5 619 aa8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 COL1A1P02452 1464 aaPredicted RBP8.57□□□□□ -1.04
CEACAM1-208ENST00000403461 ZNF804BA4D1E1 1349 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 CASP8AP2Q9UKL3 1982 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 UNCXA6NJT0 531 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 IREB2P48200 963 aaKnown RBP8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 IKBKEQ14164 716 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 SETDB1Q15047 1291 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 SUPT20HL1Q3ZLR7 823 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 KSR2Q6VAB6 950 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 C3orf58Q8NDZ4 430 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 TTLL11Q8NHH1 800 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 WNT8BQ93098 351 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 MXD3Q9BW11 206 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 DEFB129Q9H1M3 183 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 ZNF576Q9H609 170 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 GREM2Q9H772 168 aa8.56□□□□□ -1.04
CEACAM1-208ENST00000403461 PDE4DIPQ5VU43 2346 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 DDX60Q8IY21 1712 aaKnown RBP8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 FSCN2O14926 492 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 WDHD1O75717 1129 aaPredicted RBP8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 ZNF853P0CG23 659 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 ESRRAP11474 423 aaPredicted RBP8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 CDC25BP30305 580 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 PCDH1Q08174 1060 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 PRRT3Q5FWE3 981 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 LDLRAD1Q5T700 205 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 TXNDC11Q6PKC3 985 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 CD163Q86VB7 1156 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 FBXO11Q86XK2 927 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 FMR1NBQ8N0W7 255 aaPredicted RBP8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 MYH16Q9H6N6 1097 aa8.55□□□□□ -1.04
CEACAM1-208ENST00000403461 PI4KAP2A4QPH2 592 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 SOX1O00570 391 aaPredicted RBP8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 DEAF1O75398 565 aaPredicted RBP8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 USP17L7P0C7H9 530 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 TNFAIP1Q13829 316 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 MAP3K11Q16584 847 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 HABP4Q5JVS0 413 aaKnown RBP8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 OTOP1Q7RTM1 612 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 UBE3BQ7Z3V4 1068 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 ZNF804AQ7Z570 1209 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 Q8N3U1 123 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 PI4KAP1Q8N8J0 262 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 WNK4Q96J92 1243 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 VEZTQ9HBM0 779 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 OSGEPQ9NPF4 335 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 PPM1HQ9ULR3 514 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 AKAP2Q9Y2D5 859 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 PTPN22Q9Y2R2 807 aa8.54□□□□□ -1.04
CEACAM1-208ENST00000403461 ANKRD18BA2A2Z9 1011 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 APAF1O14727 1248 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 IGKV5-2P06315 115 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 CHRNA4P43681 627 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 ARL4DP49703 201 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 RBM5P52756 815 aaKnown RBP eCLIP8.53□□□□□ -1.043e-7■■□□□ 14.5
CEACAM1-208ENST00000403461 MRPL58Q14197 206 aaKnown RBP8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 ZNF423Q2M1K9 1284 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 NBPF11Q86T75 865 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 ANKRD13AQ8IZ07 590 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 C8orf58Q8NAV2 365 aa8.53□□□□□ -1.04
CEACAM1-208ENST00000403461 KLHL23Q8NBE8 558 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms