RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 BSDC1Q9NW68 430 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-204ENST00000400337 AXIN2Q9Y2T1 843 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 ZNF335Q9H4Z2 1342 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-204ENST00000400337 PALLDQ8WX93 1383 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 H0YCG3 227 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 SLFN14P0C7P3 912 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 LIFRP42702 1097 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 PDE6CP51160 858 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 LACTBP83111 547 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-204ENST00000400337 BRD3Q15059 726 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 LRRC41Q15345 812 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 DENND2CQ68D51 928 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 CACNB1Q02641 598 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-204ENST00000400337 RESTQ13127 1097 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 SLFNL1Q499Z3 407 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 HHATQ5VTY9 493 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 SMAP1Q8IYB5 467 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-204ENST00000400337 USP17L3A6NCW0 530 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 USP17L4A6NCW7 530 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 PRPF3O43395 683 aaKnown RBP19.96■□□□□ 0.79
COL18A1-204ENST00000400337 USP17L1Q7RTZ2 530 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 VPS37BQ9H9H4 285 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 TTLL3Q9Y4R7 772 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 DPY19L2Q6NUT2 758 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 ZNF577Q9BSK1 485 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 NACA2Q9H009 215 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 TNNC2P02585 160 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 NR2F2P24468 414 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 DCPSQ96C86 337 aaKnown RBP19.95■□□□□ 0.78
COL18A1-204ENST00000400337 TET3O43151 1660 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 IKBKBO14920 756 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 SF3A3Q12874 501 aaKnown RBP eCLIP19.95■□□□□ 0.783e-7■■■■□ 23.3
COL18A1-204ENST00000400337 GPR101Q96P66 508 aaPredicted RBP19.95■□□□□ 0.78
COL18A1-204ENST00000400337 ANAPC4Q9UJX5 808 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 PCDHB6Q9Y5E3 794 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 TCP1P17987 556 aaKnown RBP19.95■□□□□ 0.78
COL18A1-204ENST00000400337 GRAPQ13588 217 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 CCDC125Q86Z20 511 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 GRAPLQ8TC17 118 aaPredicted RBP19.95■□□□□ 0.78
COL18A1-204ENST00000400337 POMGNT1Q8WZA1 660 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 ANKFY1Q9P2R3 1169 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 MAN1B1Q9UKM7 699 aa19.95■□□□□ 0.78
COL18A1-204ENST00000400337 SPATA31A3Q5VYP0 1347 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 ADAT2Q7Z6V5 191 aaKnown RBP19.94■□□□□ 0.78
COL18A1-204ENST00000400337 P2RX5Q93086 422 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 DHTKD1Q96HY7 919 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-204ENST00000400337 STRBPQ96SI9 672 aaKnown RBP19.94■□□□□ 0.78
COL18A1-204ENST00000400337 MMS19Q96T76 1030 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 PARP2Q9UGN5 583 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 ABCC12Q96J65 1359 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 SLC5A4Q9NY91 659 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 FAM47CQ5HY64 1035 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 PSDA5PKW4 1024 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-204ENST00000400337 BMP3P12645 472 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 CTNNA1P35221 906 aaKnown RBP19.94■□□□□ 0.78
COL18A1-204ENST00000400337 HACE1Q8IYU2 909 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 ADCY10Q96PN6 1610 aa19.94■□□□□ 0.78
COL18A1-204ENST00000400337 KRT27Q7Z3Y8 459 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 RNF169Q8NCN4 708 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 RAB20Q9NX57 234 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 EFCAB8A8MWE9 144 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 GCFC2P16383 781 aaKnown RBP19.93■□□□□ 0.78
COL18A1-204ENST00000400337 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL18A1-204ENST00000400337 RASSF4Q9H2L5 321 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 NRBP2Q9NSY0 501 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 RAD17O75943 681 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 EEF1GP26641 437 aaKnown RBP19.93■□□□□ 0.78
COL18A1-204ENST00000400337 VPS41P49754 854 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 RASSF7Q02833 373 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 BSPRYQ5W0U4 402 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 ADPGKQ9BRR6 497 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 PLCB1Q9NQ66 1216 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 CRCPO75575 148 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 TMEM191BP0C7N4 346 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 CDC25BP30305 580 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 LGSNQ5TDP6 509 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 SCYL2Q6P3W7 929 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 CCDC110Q8TBZ0 833 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 CABS1Q96KC9 395 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 SNAP23O00161 211 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 RBL2Q08999 1139 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 ZNF658Q5TYW1 1059 aaPredicted RBP19.93■□□□□ 0.78
COL18A1-204ENST00000400337 ZNF772Q68DY9 489 aaPredicted RBP19.93■□□□□ 0.78
COL18A1-204ENST00000400337 RSAD2Q8WXG1 361 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 PPP1R13BQ96KQ4 1090 aa19.93■□□□□ 0.78
COL18A1-204ENST00000400337 CCDC160A6NGH7 325 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 HNRNPDLO14979 420 aaKnown RBP19.92■□□□□ 0.78
COL18A1-204ENST00000400337 IGBP1P78318 339 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 GPR162Q16538 588 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 CCT6BQ92526 530 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 STMN2Q93045 179 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 DPH5Q9H2P9 285 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 GABPB1Q06547 395 aaPredicted RBP19.92■□□□□ 0.78
COL18A1-204ENST00000400337 TBC1D10BQ4KMP7 808 aaPredicted RBP19.92■□□□□ 0.78
COL18A1-204ENST00000400337 DHX36Q9H2U1 1008 aaKnown RBP19.92■□□□□ 0.78
COL18A1-204ENST00000400337 SPC25Q9HBM1 224 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 hCG_1984214I3L0E3 225 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 MEIS1O00470 390 aa19.92■□□□□ 0.78
COL18A1-204ENST00000400337 ZNF713Q8N859 430 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms