RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 EFHD1Q9BUP0 239 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 DSCC1Q9BVC3 393 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 SUGCTQ9HAC7 445 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 LRRIQ4A6NIV6 560 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 PGBD1Q96JS3 809 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 APOL6Q9BWW8 343 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 TEKT2Q9UIF3 430 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 EYA1Q99502 592 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 SLC13A4Q9UKG4 626 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 COL4A3BPQ9Y5P4 624 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 GCKRQ14397 625 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 ITM2BQ9Y287 266 aa13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 GADD45BO75293 160 aaPredicted RBP13.4□□□□□ -0.26
CACNA1C-219ENST00000399649 ATP8B3O60423 1300 aa13.4□□□□□ -0.27
CACNA1C-219ENST00000399649 OR52Z1P0C646 297 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ACTN1P12814 892 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 TRIM11Q96F44 468 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 SLC38A10Q9HBR0 1119 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 LRFN2Q9ULH4 789 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 PPP2R2CQ9Y2T4 447 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 BPIFB4P59827 614 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 PTK2Q05397 1052 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ZNF654Q8IZM8 581 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ANKRD35Q8N283 1001 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 FBXL13Q8NEE6 735 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 SNX25Q9H3E2 840 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ANLNQ9NQW6 1124 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 CPSF3Q9UKF6 684 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 SLC4A1P02730 911 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 RPN1P04843 607 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 PFKFB1P16118 471 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 THRAP3Q9Y2W1 955 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 KLHDC4Q8TBB5 520 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ZNF233A6NK53 670 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 APBA3O96018 575 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ATP2B4P23634 1241 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ADAM9Q13443 819 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 GALNT17Q6IS24 598 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 F8W8V4 182 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 GCP02774 474 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 NEK8Q86SG6 692 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 TRIML1Q8N9V2 468 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 CCDC197Q8NCU1 140 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 BABAM1Q9NWV8 329 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 SEPT9Q9UHD8 586 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 FIS1Q9Y3D6 152 aa13.39□□□□□ -0.27
CACNA1C-219ENST00000399649 ZMYM6O95789 1325 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 TRIM15Q9C019 465 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 USP21Q9UK80 565 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 SGSM2O43147 1006 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 JAK2O60674 1132 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 ZNF445P59923 1031 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 MYSM1Q5VVJ2 828 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 EFCAB8A8MWE9 144 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 SYF2O95926 243 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 ARHGDIAP52565 204 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 KRT33BQ14525 404 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 SRRM1Q8IYB3 904 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 SUCLG2Q96I99 432 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 PYGLP06737 847 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 H2AFZP0C0S5 128 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 EEF1DP29692 281 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 MSH2P43246 934 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 SNX1Q13596 522 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 H2AFVQ71UI9 128 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 PRPF38AQ8NAV1 312 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 DCPSQ96C86 337 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 DESI2Q9BSY9 194 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 BAG6P46379 1132 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 POLA2Q14181 598 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 BCAS4Q8TDM0 211 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 ATP6V0A1Q93050 837 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
CACNA1C-219ENST00000399649 RLBP1P12271 317 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 GTF2IP78347 998 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 AP1ARQ63HQ0 302 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 NRBF2Q96F24 287 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 MED4Q9NPJ6 270 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 ZBTB7BO15156 539 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 GTPBP6O43824 516 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 EXOC3L4Q17RC7 722 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 CERKLQ49MI3 558 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 CCDC127Q96BQ5 260 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms