RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 CEP170P1Q96L14 293 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 TTC1Q99614 292 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 PIK3C2BO00750 1634 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 PNMA6FA0A0J9YX94 578 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 MAP3K7O43318 606 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 TUBB4BP68371 445 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 ALCAMQ13740 583 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 KRT40Q6A162 431 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 ARMCX2Q7L311 632 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 TRIML1Q8N9V2 468 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 RPF1Q9H9Y2 349 aaKnown RBP8.74□□□□□ -1.01
USP47-203ENST00000399455 POLIQ9UNA4 740 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 SGSM2O43147 1006 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 ALDH1A1P00352 501 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 TUBB4AP04350 444 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 XRCC5P13010 732 aaKnown RBP8.74□□□□□ -1.01
USP47-203ENST00000399455 ADD2P35612 726 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 PHKA2P46019 1235 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 CDK8P49336 464 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 MYOCDQ8IZQ8 938 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 SSH3Q8TE77 659 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 DCCP43146 1447 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 POLR2DO15514 142 aaKnown RBP8.74□□□□□ -1.01
USP47-203ENST00000399455 CBX1P83916 185 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 UIMC1Q96RL1 719 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 TMEM206Q9H813 350 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 SNX14Q9Y5W7 946 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 GH2P01242 217 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 DYNLL1P63167 89 aaKnown RBP8.74□□□□□ -1.01
USP47-203ENST00000399455 CDC42EP1Q00587 391 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 NCAPGQ9BPX3 1015 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 CD209Q9NNX6 404 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 ANAPC4Q9UJX5 808 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 USTQ9Y2C2 406 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 FAM160A1Q05DH4 1040 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 RAD51AP2Q09MP3 1159 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 NFIXQ14938 502 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 SLC9C1Q4G0N8 1177 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 STRIP1Q5VSL9 837 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 RINT1Q6NUQ1 792 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.74□□□□□ -1.015e-6■■■■□ 19.4
USP47-203ENST00000399455 PAIP2Q9BPZ3 127 aaKnown RBP8.74□□□□□ -1.01
USP47-203ENST00000399455 ACAD9Q9H845 621 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 ESYT2A0FGR8 921 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 A6NJR5 290 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 HOXA7P31268 230 aaPredicted RBP8.74□□□□□ -1.01
USP47-203ENST00000399455 SLC12A2P55011 1212 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 MAP7Q14244 749 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 RSBN1LQ6PCB5 846 aaPredicted RBP8.74□□□□□ -1.01
USP47-203ENST00000399455 NELFCDQ8IXH7 590 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 CCDC89Q8N998 374 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 OR6J1Q8NGC5 347 aa8.74□□□□□ -1.01
USP47-203ENST00000399455 TDRD3Q9H7E2 651 aaKnown RBP8.74□□□□□ -1.01
USP47-203ENST00000399455 SETBP1Q9Y6X0 1596 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 HNRNPDLO14979 420 aaKnown RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 RARBP10826 455 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 TSPY1Q01534 308 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 PDCL2Q8N4E4 241 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 RNF139Q8WU17 664 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 PFDN4Q9NQP4 134 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 DACT1Q9NYF0 836 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 KCNJ14Q9UNX9 436 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 MROH7-TTC4A0A0A0MT08 1334 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 KDM6AO15550 1401 aaPredicted RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 PRAMEF22A3QJZ6 481 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 KCNA4P22459 653 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 BPIFB4P59827 614 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 C9orf131Q5VYM1 1079 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 CATSPER4Q7RTX7 472 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 GPKOWQ92917 476 aaPredicted RBP eCLIP8.73□□□□□ -1.01
USP47-203ENST00000399455 METTL14Q9HCE5 456 aaKnown RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 MINPP1Q9UNW1 487 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 ABCC4O15439 1325 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 ABCA6Q8N139 1617 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 GNG11P61952 73 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 KYAT1Q16773 422 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 FAM83BQ5T0W9 1011 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 SMC5Q8IY18 1101 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 NSUN6Q8TEA1 469 aaKnown RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 DISC1Q9NRI5 854 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 ADARB2Q9NS39 739 aaKnown RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 RAB20Q9NX57 234 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 LONP1P36776 959 aaKnown RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 TERF1P54274 439 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 PPP2R3AQ06190 1150 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 LMTK2Q8IWU2 1503 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 GPR101Q96P66 508 aaPredicted RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 USP26Q9BXU7 913 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 CNTNAP4Q9C0A0 1308 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 ADCY5O95622 1261 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 S100BP04271 92 aaPredicted RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 DPEP1P16444 411 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 SYT1P21579 422 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 YY1P25490 414 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 PSMC4P43686 418 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 AP3B2Q13367 1082 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 SLFN12LQ6IEE8 588 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 ZNF365Q70YC5 407 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 MB21D1Q8N884 522 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 NELFBQ8WX92 580 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms