RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 STARD7Q9NQZ5 370 aa8.09□□□□□ -1.11
SUMO3-202ENST00000397893 HELLSQ9NRZ9 838 aa8.09□□□□□ -1.11
SUMO3-202ENST00000397893 RNF146Q9NTX7 359 aa8.09□□□□□ -1.11
SUMO3-202ENST00000397893 TCP11L1Q9NUJ3 509 aa8.09□□□□□ -1.11
SUMO3-202ENST00000397893 TMEM39AQ9NV64 488 aa8.09□□□□□ -1.11
SUMO3-202ENST00000397893 MYH8P13535 1937 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 TSPY2A6NKD2 308 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 ARVCFO00192 962 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 CD2BP2O95400 341 aaKnown RBP8.08□□□□□ -1.12
SUMO3-202ENST00000397893 TIMP1P01033 207 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 CD4P01730 458 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 ASGR1P07306 291 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 RAG1P15918 1043 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 SMPD1P17405 629 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 PPP4R3BQ5MIZ7 849 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 MCTP1Q6DN14 999 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 TTBK2Q6IQ55 1244 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 ZNF589Q86UQ0 364 aaPredicted RBP8.08□□□□□ -1.12
SUMO3-202ENST00000397893 FAM126BQ8IXS8 530 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 NUP133Q8WUM0 1156 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 CHMP4CQ96CF2 233 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 VWCEQ96DN2 955 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 FAM161BQ96MY7 647 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 TRERF1Q96PN7 1200 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 PPP1R9BQ96SB3 815 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 USP26Q9BXU7 913 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 PDGFCQ9NRA1 345 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 HOMER2Q9NSB8 354 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 CYP39A1Q9NYL5 469 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 STX8Q9UNK0 236 aa8.08□□□□□ -1.12
SUMO3-202ENST00000397893 ZMYM6O95789 1325 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 NCOR1O75376 2440 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 DCDC2CA8MYV0 355 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 RIOK3O14730 519 aaKnown RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 RRP9O43818 475 aaKnown RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 ICAM1P05362 532 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 C6orf222P0C671 652 aaPredicted RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 SNHG28P0DPA3 235 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 HSPD1P10809 573 aaKnown RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 ALAS1P13196 640 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 MCM2P49736 904 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 ZNF445P59923 1031 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 BEX3Q00994 111 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 FPGSQ05932 587 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 NMIQ13287 307 aaPredicted RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 MCMDC2Q4G0Z9 681 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 GNASQ5JWF2 1037 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 TMEM240Q5SV17 173 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 ZNF697Q5TEC3 545 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 MFSD5Q6N075 450 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 ZSCAN30Q86W11 494 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 GAS2L3Q86XJ1 694 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 PCSK9Q8NBP7 692 aaKnown RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 DCAF4Q8WV16 495 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 CLEC4DQ8WXI8 215 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 GLT1D1Q96MS3 346 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 TMEM47Q9BQJ4 181 aa8.07□□□□□ -1.12
SUMO3-202ENST00000397893 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.07□□□□□ -1.125e-8■□□□□ 8.8
SUMO3-202ENST00000397893 RANBP17Q9H2T7 1088 aaKnown RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 CTDP1Q9Y5B0 961 aaPredicted RBP8.07□□□□□ -1.12
SUMO3-202ENST00000397893 TMEM265A0A087WTH1 108 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 A0A0U1RQG5 324 aaPredicted RBP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 RBM47A0AV96 593 aaKnown RBP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 ASB14A6NK59 587 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 NFIBO00712 420 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 RANBP6O60518 1105 aaKnown RBP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 TOP1P11387 765 aaKnown RBP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 SDSP20132 328 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 SLC16A2P36021 539 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 NUBP1P53384 320 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 TNFAIP2Q03169 654 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 BAATQ14032 418 aaPredicted RBP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 HSP90AA2PQ14568 343 aaPredicted RBP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 IQSEC1Q6DN90 963 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 CCDC174Q6PII3 467 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 CXCL17Q6UXB2 119 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 TBC1D10CQ8IV04 446 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 RNPC3Q96LT9 517 aaKnown RBP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 COL25A1Q9BXS0 654 aaPredicted RBP8.06□□□□□ -1.12
SUMO3-202ENST00000397893 OSBPL3Q9H4L5 887 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 Q9Y3F1 56 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 PLXNA1Q9UIW2 1896 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 CHD7Q9P2D1 2997 aa8.06□□□□□ -1.12
SUMO3-202ENST00000397893 UMODL1Q5DID0 1318 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 BDP1A6H8Y1 2624 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 EYSQ5T1H1 3165 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 VCANP13611 3396 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 LOC102724159A0A0B4J2E5 919 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.05□□□□□ -1.12
SUMO3-202ENST00000397893 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.05□□□□□ -1.12
SUMO3-202ENST00000397893 DYNC1LI2O43237 492 aaPredicted RBP8.05□□□□□ -1.12
SUMO3-202ENST00000397893 MBD3O95983 291 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 PDHBP11177 359 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 CHRM1P11229 460 aaPredicted RBP8.05□□□□□ -1.12
SUMO3-202ENST00000397893 CSF2RAP15509 400 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 EDNRBP24530 442 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 ZNF543Q08ER8 600 aa8.05□□□□□ -1.12
SUMO3-202ENST00000397893 GRIN2CQ14957 1233 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms