RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 ZBBXA8MT70 800 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 FOXP2O15409 715 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 PFKMP08237 780 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 CYP2C9P11712 490 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 KCNQ1P51787 676 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 DUSP28Q4G0W2 176 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 C20orf194Q5TEA3 1177 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 RCSD1Q6JBY9 416 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 KIAA1211Q6ZU35 1233 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 IL27Q8NEV9 243 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 MTCH2Q9Y6C9 303 aa19.1■□□□□ 0.65
CUX2-202ENST00000397643 TANC1Q9C0D5 1861 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 TNKSO95271 1327 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 RFXAPO00287 272 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 ERC2O15083 957 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 NMT2O60551 498 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 CA3P07451 260 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 PURAQ00577 322 aaKnown RBP19.09■□□□□ 0.65
CUX2-202ENST00000397643 NSMFQ6X4W1 530 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 NACAP1Q9BZK3 213 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 TSPYL2Q9H2G4 693 aaPredicted RBP19.09■□□□□ 0.65
CUX2-202ENST00000397643 CCPG1Q9ULG6 757 aa19.09■□□□□ 0.65
CUX2-202ENST00000397643 ARHGEF15O94989 841 aa19.08■□□□□ 0.64
CUX2-202ENST00000397643 ICAM1P05362 532 aa19.08■□□□□ 0.64
CUX2-202ENST00000397643 NOVP48745 357 aa19.08■□□□□ 0.64
CUX2-202ENST00000397643 GPATCH3Q96I76 525 aa19.08■□□□□ 0.64
CUX2-202ENST00000397643 NAPBQ9H115 298 aa19.08■□□□□ 0.64
CUX2-202ENST00000397643 RANBP17Q9H2T7 1088 aaKnown RBP19.08■□□□□ 0.64
CUX2-202ENST00000397643 DCTPP1Q9H773 170 aa19.08■□□□□ 0.64
CUX2-202ENST00000397643 STX8Q9UNK0 236 aa19.08■□□□□ 0.64
CUX2-202ENST00000397643 RBM47A0AV96 593 aaKnown RBP19.07■□□□□ 0.64
CUX2-202ENST00000397643 SLC3A2P08195 630 aaKnown RBP19.07■□□□□ 0.64
CUX2-202ENST00000397643 SUPT20HL2P0C7V6 817 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 ALDH5A1P51649 535 aaPredicted RBP19.07■□□□□ 0.64
CUX2-202ENST00000397643 BAATQ14032 418 aaPredicted RBP19.07■□□□□ 0.64
CUX2-202ENST00000397643 TMEM67Q5HYA8 995 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 ZMYM1Q5SVZ6 1142 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 DEFB128Q7Z7B8 93 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 PI4K2BQ8TCG2 481 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 WDR11Q9BZH6 1224 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 INCENPQ9NQS7 918 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 POLR3EQ9NVU0 708 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 TET1Q8NFU7 2136 aa19.07■□□□□ 0.64
CUX2-202ENST00000397643 NFIBO00712 420 aa19.06■□□□□ 0.64
CUX2-202ENST00000397643 KRT40Q6A162 431 aa19.06■□□□□ 0.64
CUX2-202ENST00000397643 CERS4Q9HA82 394 aa19.06■□□□□ 0.64
CUX2-202ENST00000397643 BRWD1Q9NSI6 2320 aa19.06■□□□□ 0.64
CUX2-202ENST00000397643 LOC102724159A0A0B4J2E5 919 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 TSPY2A6NKD2 308 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 PWP2Q15269 919 aaKnown RBP19.05■□□□□ 0.64
CUX2-202ENST00000397643 AAK1Q2M2I8 961 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 PPP4R3BQ5MIZ7 849 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 TTBK2Q6IQ55 1244 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 BTNL9Q6UXG8 535 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 SLC30A10Q6XR72 485 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 PPP1R13LQ8WUF5 828 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 SLC9A7Q96T83 725 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 MTG1Q9BT17 334 aaPredicted RBP19.05■□□□□ 0.64
CUX2-202ENST00000397643 C1QTNF1Q9BXJ1 281 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 ADD3Q9UEY8 706 aaKnown RBP19.05■□□□□ 0.64
CUX2-202ENST00000397643 PTPRSQ13332 1948 aa19.05■□□□□ 0.64
CUX2-202ENST00000397643 PITPNM1O00562 1244 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 MYL3P08590 195 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 IQCF3P0C7M6 154 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 RFC2P35250 354 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 CPT1AP50416 773 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 TAP1Q03518 808 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 CTDSPL2Q05D32 466 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 SKIV2LQ15477 1246 aaKnown RBP19.04■□□□□ 0.64
CUX2-202ENST00000397643 NBPF20Q3BBV1 942 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 SPRED2Q7Z698 418 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 OR6J1Q8NGC5 347 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 DCAF4Q8WV16 495 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 FAM122AQ96E09 287 aa19.04■□□□□ 0.64
CUX2-202ENST00000397643 COL4A4P53420 1690 aaPredicted RBP19.04■□□□□ 0.64
CUX2-202ENST00000397643 TTC41PQ6P2S7 1318 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 GTPBP6O43824 516 aaPredicted RBP19.03■□□□□ 0.64
CUX2-202ENST00000397643 EDNRBP24530 442 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 SLC16A2P36021 539 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 CCDC96Q2M329 555 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 LRRFIP1Q32MZ4 808 aaKnown RBP19.03■□□□□ 0.64
CUX2-202ENST00000397643 NFRKBQ6P4R8 1299 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 HERC6Q8IVU3 1022 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 PHOSPHO2Q8TCD6 241 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 OTUD7AQ8TE49 926 aaPredicted RBP19.03■□□□□ 0.64
CUX2-202ENST00000397643 CLEC4DQ8WXI8 215 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 MTMR7Q9Y216 660 aa19.03■□□□□ 0.64
CUX2-202ENST00000397643 A6NJR5 290 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 LPXNO60711 386 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 ACTN1P12814 892 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 SYDE2Q5VT97 1194 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 ARNTL2Q8WYA1 636 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 FSD1Q9BTV5 496 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 EPHX3Q9H6B9 360 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 ANAPC4Q9UJX5 808 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 COG5Q9UP83 839 aa19.02■□□□□ 0.64
CUX2-202ENST00000397643 TLL1O43897 1013 aa19.01■□□□□ 0.63
CUX2-202ENST00000397643 ORC4O43929 436 aa19.01■□□□□ 0.63
CUX2-202ENST00000397643 FGRP09769 529 aa19.01■□□□□ 0.63
CUX2-202ENST00000397643 HOXD11P31277 338 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms