RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 PABPC4Q13310 644 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEB-203ENST00000397345 BAG1Q99933 345 aaPredicted RBP2.77□□□□□ -1.97
NEB-203ENST00000397345 NAPBQ9H115 298 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 NCOA1Q15788 1441 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 WDR7Q9Y4E6 1490 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 O00370 1275 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 ZNF662Q6ZS27 426 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 SRLQ86TD4 932 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 RABGGTAQ92696 567 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 NAT9Q9BTE0 207 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 ZC4H2Q9NQZ6 224 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 FKBP3Q00688 224 aaKnown RBP2.77□□□□□ -1.97
NEB-203ENST00000397345 SCRN1Q12765 414 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 LAMC2Q13753 1193 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 PI16Q6UXB8 463 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 TDRD7Q8NHU6 1098 aaKnown RBP2.77□□□□□ -1.97
NEB-203ENST00000397345 STAP2Q9UGK3 403 aa2.77□□□□□ -1.97
NEB-203ENST00000397345 KPNA2P52292 529 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 SLC7A5Q01650 507 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 ENOX1Q8TC92 643 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 ZKSCAN3Q9BRR0 538 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 TEX12Q9BXU0 123 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 FAM135AQ9P2D6 1515 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 PFASO15067 1338 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 MTSS1O43312 755 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 KLHL41O60662 606 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 HADHQ16836 314 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 FBF1Q8TES7 1133 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 CEP44Q9C0F1 390 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 KDM4CQ9H3R0 1056 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 CABP2Q9NPB3 220 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 PRDM11Q9NQV5 511 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 USP16Q9Y5T5 823 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 PYGLP06737 847 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 TAP1Q03518 808 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 MIEF2Q96C03 454 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 KCNK9Q9NPC2 374 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 MAPRE3Q9UPY8 281 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 SYNRGQ9UMZ2 1314 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 ZPR1O75312 459 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 CTCFP49711 727 aaPredicted RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 PDE6CP51160 858 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 TEX9Q8N6V9 391 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 MKNK2Q9HBH9 465 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 DDX25Q9UHL0 483 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 B3GALNT1O75752 331 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 DTHD1Q6ZMT9 781 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 LPIN2Q92539 896 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 PDLIM2Q96JY6 352 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 FAM200BP0CF97 657 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 GNGT1P63211 74 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 MED21Q13503 144 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 TJAP1Q5JTD0 557 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 FKBP9P1Q75LS8 142 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 SDCCAG8Q86SQ7 713 aaPredicted RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 CDKL2Q92772 493 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 CAPS2Q9BXY5 557 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 HYOU1Q9Y4L1 999 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 MROH5Q6ZUA9 1318 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 ARHGAP10A1A4S6 786 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 DNM2P50570 870 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEB-203ENST00000397345 TSC22D4Q9Y3Q8 395 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 CREBBPQ92793 2442 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 CHUKO15111 745 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 LMOD1P29536 600 aaPredicted RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 SSRP1Q08945 709 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 GOLGA8FQ08AF8 430 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 GOLGA8DPQ0D2H9 430 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 HLTFQ14527 1009 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEB-203ENST00000397345 FBXO38Q6PIJ6 1188 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 ANKRD13DQ6ZTN6 518 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 C8orf37Q96NL8 207 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 EPAS1Q99814 870 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 ZBED2Q9BTP6 218 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 INTUQ9ULD6 942 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 FAM169AQ9Y6X4 670 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 ZRANB2O95218 330 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEB-203ENST00000397345 FAM163BP0C2L3 166 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 CABP4P57796 275 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 ADCY2Q08462 1091 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 MRPL46Q9H2W6 279 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 CTTNBP2NLQ9P2B4 639 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 BBOX1O75936 387 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 SHQ1Q6PI26 577 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 MAEAQ7L5Y9 396 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 RFX7Q2KHR2 1363 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 WDR46O15213 610 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 DEXIO95424 95 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 TTKP33981 857 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 GSCP56915 257 aaPredicted RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 NOB1Q9ULX3 412 aaKnown RBP2.76□□□□□ -1.97
NEB-203ENST00000397345 PIK3C2GO75747 1445 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 BAG2O95816 211 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 CHMLP26374 656 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 PHBP35232 272 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 MAP3K7CLP57077 242 aa2.76□□□□□ -1.97
NEB-203ENST00000397345 KLHDC4Q8TBB5 520 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms