RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 CLEC4DQ8WXI8 215 aa15.49■□□□□ 0.07
MCF2L-209ENST00000397036 WNK4Q96J92 1243 aa15.49■□□□□ 0.07
MCF2L-209ENST00000397036 MS4A4AQ96JQ5 239 aa15.49■□□□□ 0.07
MCF2L-209ENST00000397036 GPBP1L1Q9HC44 474 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-209ENST00000397036 TMEM260Q9NX78 707 aa15.49■□□□□ 0.07
MCF2L-209ENST00000397036 FBXO2Q9UK22 296 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-209ENST00000397036 WNT7AO00755 349 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 EDIL3O43854 480 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 CYP3A4P08684 503 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 CETPP11597 493 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 ATP2B1P20020 1258 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 CIITAP33076 1130 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 SREBF1P36956 1147 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 UBE2SQ16763 222 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 GPAT2Q6NUI2 795 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 GADL1Q6ZQY3 521 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 GTF3C2Q8WUA4 911 aaPredicted RBP15.48■□□□□ 0.07
MCF2L-209ENST00000397036 SYAP1Q96A49 352 aaPredicted RBP15.48■□□□□ 0.07
MCF2L-209ENST00000397036 MBOAT7Q96N66 472 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 TEX13BQ9BXU2 312 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 ANO3Q9BYT9 981 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 RAVER2Q9HCJ3 691 aaKnown RBP15.48■□□□□ 0.07
MCF2L-209ENST00000397036 RABGAP1Q9Y3P9 1069 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 RLFQ13129 1914 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 SPDYE3A6NKU9 549 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 KIF3CO14782 793 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 MARCKSP29966 332 aaPredicted RBP15.48■□□□□ 0.07
MCF2L-209ENST00000397036 TMEM132BQ14DG7 1078 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 SPRYD7Q5W111 196 aa15.48■□□□□ 0.07
MCF2L-209ENST00000397036 CCAR1Q8IX12 1150 aaKnown RBP15.48■□□□□ 0.07
MCF2L-209ENST00000397036 PTPRFP10586 1907 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 OSBPP22059 807 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 MCM7P33993 719 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 STAT3P40763 770 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-209ENST00000397036 LETM2Q2VYF4 491 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 RESP18Q5W5W9 173 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.47■□□□□ 0.07
MCF2L-209ENST00000397036 CPXCR1Q8N123 301 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 ENGASEQ8NFI3 743 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 MRPS27Q92552 414 aaKnown RBP15.47■□□□□ 0.07
MCF2L-209ENST00000397036 P2RX7Q99572 595 aaKnown RBP15.47■□□□□ 0.07
MCF2L-209ENST00000397036 ASCC2Q9H1I8 757 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-209ENST00000397036 EHMT1Q9H9B1 1298 aa15.47■□□□□ 0.07
MCF2L-209ENST00000397036 DDX19AQ9NUU7 478 aaKnown RBP15.47■□□□□ 0.07
MCF2L-209ENST00000397036 TESPA1A2RU30 521 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-209ENST00000397036 CCNT1O60563 726 aaKnown RBP15.46■□□□□ 0.07
MCF2L-209ENST00000397036 CFBP00751 764 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 ALAS1P13196 640 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 COPB2P35606 906 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 ARHGAP4P98171 946 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 FAM160A1Q05DH4 1040 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-209ENST00000397036 SMC1BQ8NDV3 1235 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 CHST13Q8NET6 341 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 TRERF1Q96PN7 1200 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 PNMA3Q9UL41 463 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 HPSEQ9Y251 543 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 LOC285556D6RIA3 1793 aa15.46■□□□□ 0.07
MCF2L-209ENST00000397036 NEMFO60524 1076 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 LETM1O95202 739 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-209ENST00000397036 LIG1P18858 919 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 LONP1P36776 959 aaKnown RBP15.45■□□□□ 0.06
MCF2L-209ENST00000397036 HUNKP57058 714 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 HERVK_113P62684 666 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 CAVIN1Q6NZI2 390 aaKnown RBP15.45■□□□□ 0.06
MCF2L-209ENST00000397036 SHC4Q6S5L8 630 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 CCDC73Q6ZRK6 1079 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 ANKRD23Q86SG2 305 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 SAPCD2Q86UD0 394 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 RIOX2Q8IUF8 465 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 FSIP1Q8NA03 581 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 TBC1D5Q92609 795 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 HHIPL1Q96JK4 782 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 MTMR9Q96QG7 549 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 TMEM63CQ9P1W3 806 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 FBXO40Q9UH90 709 aa15.45■□□□□ 0.06
MCF2L-209ENST00000397036 PARP14Q460N5 1801 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 NFIBO00712 420 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 TBX3O15119 743 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 SNW1Q13573 536 aaKnown RBP15.44■□□□□ 0.06
MCF2L-209ENST00000397036 Q4G0T1 1027 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 CCDC183Q5T5S1 534 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 SNRNP48Q6IEG0 339 aaKnown RBP15.44■□□□□ 0.06
MCF2L-209ENST00000397036 POTEEQ6S8J3 1075 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 ELOA2Q8IYF1 753 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-209ENST00000397036 FMR1NBQ8N0W7 255 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-209ENST00000397036 CLIC6Q96NY7 704 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 TMEM60Q9H2L4 133 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 ZCCHC17Q9NP64 241 aaKnown RBP15.44■□□□□ 0.06
MCF2L-209ENST00000397036 RNF146Q9NTX7 359 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 DACT1Q9NYF0 836 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 RIPK3Q9Y572 518 aa15.44■□□□□ 0.06
MCF2L-209ENST00000397036 SMCHD1A6NHR9 2005 aa15.43■□□□□ 0.06
MCF2L-209ENST00000397036 TOMM70O94826 608 aa15.43■□□□□ 0.06
MCF2L-209ENST00000397036 SLC25A27O95847 323 aa15.43■□□□□ 0.06
MCF2L-209ENST00000397036 OR52Z1P0C646 297 aa15.43■□□□□ 0.06
MCF2L-209ENST00000397036 HOXA13P31271 388 aaPredicted RBP15.43■□□□□ 0.06
MCF2L-209ENST00000397036 MUM1L1Q5H9M0 696 aa15.43■□□□□ 0.06
MCF2L-209ENST00000397036 DTHD1Q6ZMT9 781 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms