RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 TRIM47Q96LD4 638 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 RIC8AQ9NPQ8 531 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 BLOC1S4Q9NUP1 217 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 PLSCR1O15162 318 aa18.58■□□□□ 0.57
TRIM39-205ENST00000396551 FCER1AP12319 257 aa18.58■□□□□ 0.57
TRIM39-205ENST00000396551 FXR2P51116 673 aaKnown RBP eCLIP18.58■□□□□ 0.57
TRIM39-205ENST00000396551 ASIC1P78348 528 aa18.58■□□□□ 0.57
TRIM39-205ENST00000396551 ATP2B2Q01814 1243 aa18.58■□□□□ 0.57
TRIM39-205ENST00000396551 STIM1Q13586 685 aa18.58■□□□□ 0.57
TRIM39-205ENST00000396551 ZNF507Q8TCN5 953 aa18.58■□□□□ 0.57
TRIM39-205ENST00000396551 PPP1R18Q6NYC8 613 aa18.58■□□□□ 0.56
TRIM39-205ENST00000396551 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.56
TRIM39-205ENST00000396551 DHTKD1Q96HY7 919 aaPredicted RBP18.58■□□□□ 0.56
TRIM39-205ENST00000396551 CARD6Q9BX69 1037 aa18.58■□□□□ 0.56
TRIM39-205ENST00000396551 EHD4Q9H223 541 aa18.58■□□□□ 0.56
TRIM39-205ENST00000396551 SLX4Q8IY92 1834 aa18.58■□□□□ 0.56
TRIM39-205ENST00000396551 FAM196BA6NMK8 535 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 USP17L10C9JJH3 530 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 EEF1GP26641 437 aaKnown RBP18.57■□□□□ 0.56
TRIM39-205ENST00000396551 MB21D1Q8N884 522 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 MTMR8Q96EF0 704 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 ZDHHC15Q96MV8 337 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 EXOC1Q9NV70 894 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 LRWD1Q9UFC0 647 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 LGALS16A8MUM7 142 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 MAP3K9P80192 1104 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 CCDC96Q2M329 555 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 PODNQ7Z5L7 613 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 KIAA0825Q8IV33 1275 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 DHX37Q8IY37 1157 aaKnown RBP18.57■□□□□ 0.56
TRIM39-205ENST00000396551 CALML4Q96GE6 196 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 NUP88Q99567 741 aaPredicted RBP18.57■□□□□ 0.56
TRIM39-205ENST00000396551 LZTFL1Q9NQ48 299 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 TADA3O75528 432 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 APBA3O96018 575 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 TPM1P09493 284 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 TNNI2P48788 182 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 TRIM14Q14142 442 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 HPS3Q969F9 1004 aa18.57■□□□□ 0.56
TRIM39-205ENST00000396551 DDTLA6NHG4 134 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-205ENST00000396551 POTEMA6NI47 508 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 CCNE1P24864 410 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 GPATCH4Q5T3I0 446 aaKnown RBP18.56■□□□□ 0.56
TRIM39-205ENST00000396551 ANKRD40Q6AI12 368 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 KIAA0895Q8NCT3 520 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 ACRBPQ8NEB7 543 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 P2RX5Q93086 422 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 FEZ1Q99689 392 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 NUDT12Q9BQG2 462 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 TCP10Q12799 353 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 FAM198AQ9UFP1 575 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 MRFAP1Q9Y605 127 aa18.56■□□□□ 0.56
TRIM39-205ENST00000396551 ZBTB5O15062 677 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 H2AFXP16104 143 aaPredicted RBP18.55■□□□□ 0.56
TRIM39-205ENST00000396551 HMGB2P26583 209 aaKnown RBP18.55■□□□□ 0.56
TRIM39-205ENST00000396551 KRT9P35527 623 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 MCM6Q14566 821 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 SH3BP5LQ7L8J4 393 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 TMTC1Q8IUR5 882 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 EEF2KMTQ96G04 330 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 DDX41Q9UJV9 622 aaKnown RBP18.55■□□□□ 0.56
TRIM39-205ENST00000396551 MYMKA6NI61 221 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 CSGALNACT2Q8N6G5 542 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 TMX4Q9H1E5 349 aaPredicted RBP18.55■□□□□ 0.56
TRIM39-205ENST00000396551 A0A1W2PQC6 194 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 TTC26A0AVF1 554 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 AMPD3Q01432 767 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 DACT2Q5SW24 774 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 CCDC47Q96A33 483 aaKnown RBP18.55■□□□□ 0.56
TRIM39-205ENST00000396551 CCDC17Q96LX7 622 aa18.55■□□□□ 0.56
TRIM39-205ENST00000396551 PPP4R3AQ6IN85 833 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 SV2BQ7L1I2 683 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 C2CD5Q86YS7 1000 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 NOC3LQ8WTT2 800 aaKnown RBP18.54■□□□□ 0.56
TRIM39-205ENST00000396551 CUL5Q93034 780 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 NKRFO15226 690 aaKnown RBP eCLIP18.54■□□□□ 0.56
TRIM39-205ENST00000396551 ABL1P00519 1130 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 TMEM266Q2M3C6 531 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 ARHGAP29Q52LW3 1261 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 COBLL1Q53SF7 1204 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 KCNK18Q7Z418 384 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 MNS1Q8NEH6 495 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 HAS1Q92839 578 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 STK17AQ9UEE5 414 aa18.54■□□□□ 0.56
TRIM39-205ENST00000396551 PDIA5Q14554 519 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 STRIP1Q5VSL9 837 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 CYP26C1Q6V0L0 522 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 LARP4BQ92615 738 aaKnown RBP18.53■□□□□ 0.56
TRIM39-205ENST00000396551 GJA10Q969M2 543 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 CHP1Q99653 195 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 B4DLN1 442 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 ECE2O60344 883 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 EEF2P13639 858 aaKnown RBP18.53■□□□□ 0.56
TRIM39-205ENST00000396551 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 TUBGCP2Q9BSJ2 902 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 MRIQ9BWK5 157 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 SEMA6BQ9H3T3 888 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 SLC39A2Q9NP94 309 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 ZNF446Q9NWS9 450 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 OGFRQ9NZT2 677 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms