RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 PPP1R2P41236 205 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 LONRF2Q1L5Z9 754 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 CCDC47Q96A33 483 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 PLIN2Q99541 437 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 DUSP9Q99956 384 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 C7orf25Q9BPX7 421 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 TRIM9Q9C026 710 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 MTMR7Q9Y216 660 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 CCNE1P24864 410 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 BTDP43251 543 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 AMPD2Q01433 879 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 SMC1AQ14683 1233 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 BICDL2A1A5D9 508 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 SMCO2A6NFE2 343 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 CCNT1O60563 726 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 NOVP48745 357 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 MEA1Q16626 185 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 LETM2Q2VYF4 491 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 WDR59Q6PJI9 974 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 ZNF662Q6ZS27 426 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 NEK8Q86SG6 692 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 RRP36Q96EU6 259 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 TTYH3Q9C0H2 523 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 HAUS4Q9H6D7 363 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 MAP2K7O14733 419 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 COBLL1Q53SF7 1204 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 CSGALNACT2Q8N6G5 542 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 RETREG2Q8NC44 543 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 P2RX5Q93086 422 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 TUBGCP2Q9BSJ2 902 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 EXOC1Q9NV70 894 aa17.88■□□□□ 0.45
CCHCR1-202ENST00000396263 QSER1Q2KHR3 1735 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 MMP10P09238 476 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 PLCG2P16885 1265 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 TSR1Q2NL82 804 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 NUP58Q9BVL2 599 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 CPVLQ9H3G5 476 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 CD209Q9NNX6 404 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 RSPH14Q9UHP6 348 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 ESYT2A0FGR8 921 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 KLRG2A4D1S0 409 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 CTAGE15A4D2H0 777 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 PSMD14O00487 310 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 CTAGE8P0CG41 777 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 OAS2P29728 719 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 AMPD3Q01432 767 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 PDE4DQ08499 809 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 SLC15A2Q16348 729 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 CTAGE6Q86UF2 777 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 FAM114A1Q8IWE2 563 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 CTAGE4Q8IX94 777 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 TEX11Q8IYF3 940 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 GPR101Q96P66 508 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 SEC63Q9UGP8 760 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 MYO6Q9UM54 1294 aa17.87■□□□□ 0.45
CCHCR1-202ENST00000396263 B4DLN1 442 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 PES1O00541 588 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 IL1R1P14778 569 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 BEND6Q5SZJ8 279 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 USP17L2Q6R6M4 530 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 FAM163AQ96GL9 167 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 PNKPQ96T60 521 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 TUBBP07437 444 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 GPSM2P81274 684 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 MUM1L1Q5H9M0 696 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 SOGA3Q5TF21 947 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 DEFB132Q7Z7B7 95 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 RBM17Q96I25 401 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 MMTAG2Q9BU76 263 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 LCMT1Q9UIC8 334 aa17.86■□□□□ 0.45
CCHCR1-202ENST00000396263 FOCADQ5VW36 1801 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 hCG_1984214I3L0E3 225 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 TRIM66O15016 1216 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 ERLIN1O75477 346 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 RHBDL3P58872 404 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 HERVK_113P62684 666 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 ASIC1P78348 528 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 STK4Q13043 487 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 ANKRD40Q6AI12 368 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 ZNF713Q8N859 430 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 CEP95Q96GE4 821 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 CNOT6LQ96LI5 555 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 LRRC37AA6NMS7 1700 aa17.85■□□□□ 0.45
CCHCR1-202ENST00000396263 ATP2B4P23634 1241 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 HOXA10P31260 410 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 KRT83P78385 493 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 TRAPPC11Q7Z392 1133 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 ZSCAN29Q8IWY8 852 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 TBCKQ8TEA7 893 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 RIOX1Q9H6W3 641 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 ZCCHC17Q9NP64 241 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 GUCA1BQ9UMX6 200 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 RASSF10A6NK89 507 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 TFRCP02786 760 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 TECP42680 631 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 FIGNQ5HY92 759 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 CNNM4Q6P4Q7 775 aa17.84■□□□□ 0.45
CCHCR1-202ENST00000396263 REXO1Q8N1G1 1221 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms