RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 BTBD7Q9P203 1132 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 FAM155AB1AL88 458 aaPredicted RBP17.26■□□□□ 0.35
PTPN20-206ENST00000395722 GCOM1H8Y6P7 765 aaPredicted RBP17.26■□□□□ 0.35
PTPN20-206ENST00000395722 POLR2MP0CAP2 368 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 ALAS1P13196 640 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 STAT3P40763 770 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 SNRNP48Q6IEG0 339 aaKnown RBP17.26■□□□□ 0.35
PTPN20-206ENST00000395722 CRYGNQ8WXF5 182 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 TBC1D5Q92609 795 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 MAP3K20Q9NYL2 800 aaKnown RBP17.26■□□□□ 0.35
PTPN20-206ENST00000395722 PNMA3Q9UL41 463 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 RIPK3Q9Y572 518 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 NFIBO00712 420 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 STK38Q15208 465 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 KCNG4Q8TDN1 519 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 GTF3C2Q8WUA4 911 aaPredicted RBP17.25■□□□□ 0.35
PTPN20-206ENST00000395722 TRERF1Q96PN7 1200 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 PTPN18Q99952 460 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 ANO3Q9BYT9 981 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 RNF146Q9NTX7 359 aa17.25■□□□□ 0.35
PTPN20-206ENST00000395722 MANSC4A6NHS7 340 aaPredicted RBP17.24■□□□□ 0.35
PTPN20-206ENST00000395722 PDHXO00330 501 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 SPTLC2O15270 562 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 BMP15O95972 392 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 ORC2Q13416 577 aaPredicted RBP17.24■□□□□ 0.35
PTPN20-206ENST00000395722 NEK8Q86SG6 692 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 RIOX2Q8IUF8 465 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 PGBD1Q96JS3 809 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 RBPJLQ9UBG7 517 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 PPP6R2O75170 966 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 GADD45BO75293 160 aaPredicted RBP17.24■□□□□ 0.35
PTPN20-206ENST00000395722 CFBP00751 764 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 HOXA13P31271 388 aaPredicted RBP17.24■□□□□ 0.35
PTPN20-206ENST00000395722 FAM43AQ8N2R8 423 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 CCDC102AQ96A19 550 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 CEP131Q9UPN4 1083 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 MYH7BA7E2Y1 1941 aa17.24■□□□□ 0.35
PTPN20-206ENST00000395722 ATP2B1P20020 1258 aa17.23■□□□□ 0.35
PTPN20-206ENST00000395722 SREBF1P36956 1147 aa17.23■□□□□ 0.35
PTPN20-206ENST00000395722 UBE2HP62256 183 aa17.23■□□□□ 0.35
PTPN20-206ENST00000395722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPN20-206ENST00000395722 SPATC1LQ9H0A9 340 aa17.23■□□□□ 0.35
PTPN20-206ENST00000395722 TXNRD2Q9NNW7 524 aa17.23■□□□□ 0.35
PTPN20-206ENST00000395722 ZCCHC17Q9NP64 241 aaKnown RBP17.23■□□□□ 0.35
PTPN20-206ENST00000395722 SPDYE3A6NKU9 549 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 ZNF174Q15697 407 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 C4orf32Q8N8J7 132 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 CHST13Q8NET6 341 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 HOMER2Q9NSB8 354 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 ABT1Q9ULW3 272 aaKnown RBP17.22■□□□□ 0.35
PTPN20-206ENST00000395722 CYP2C8P10632 490 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 USP11P51784 963 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 ATP2C1P98194 919 aaPredicted RBP17.22■□□□□ 0.35
PTPN20-206ENST00000395722 AXDND1Q5T1B0 1012 aaPredicted RBP17.22■□□□□ 0.35
PTPN20-206ENST00000395722 SYTL5Q8TDW5 730 aaPredicted RBP17.22■□□□□ 0.35
PTPN20-206ENST00000395722 ACAD9Q9H845 621 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 PCDHA7Q9UN72 937 aa17.22■□□□□ 0.35
PTPN20-206ENST00000395722 FRMPD4Q14CM0 1322 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 RPTORQ8N122 1335 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 PEX10O60683 326 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 CYP3A4P08684 503 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 COPB2P35606 906 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 PLS1Q14651 629 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 MOXD1Q6UVY6 613 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 JMYQ8N9B5 988 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 MBOAT7Q96N66 472 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 MOV10L1Q9BXT6 1211 aaKnown RBP17.21■□□□□ 0.35
PTPN20-206ENST00000395722 COL20A1Q9P218 1284 aa17.21■□□□□ 0.35
PTPN20-206ENST00000395722 CYP3A7-CYP3A51PA0A087WV96 503 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 CYP3A7P24462 503 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 MCM7P33993 719 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 GCLCP48506 637 aaPredicted RBP17.2■□□□□ 0.34
PTPN20-206ENST00000395722 INHBEP58166 350 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 RPS6P62753 249 aaKnown RBP17.2■□□□□ 0.34
PTPN20-206ENST00000395722 ARHGAP4P98171 946 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 MORF4L1Q9UBU8 362 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 FBXO40Q9UH90 709 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 FBXO2Q9UK22 296 aaPredicted RBP17.2■□□□□ 0.34
PTPN20-206ENST00000395722 IGF2BP3O00425 579 aaKnown RBP eCLIP17.2■□□□□ 0.34
PTPN20-206ENST00000395722 SLC25A27O95847 323 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
PTPN20-206ENST00000395722 PTPREP23469 700 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
PTPN20-206ENST00000395722 ME1P48163 572 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 PTGDRQ13258 359 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
PTPN20-206ENST00000395722 ADALQ6DHV7 355 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 SLC30A10Q6XR72 485 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 RNF207Q6ZRF8 634 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 FCHSD1Q86WN1 690 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 GPT2Q8TD30 523 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 PARK7Q99497 189 aaKnown RBP17.2■□□□□ 0.34
PTPN20-206ENST00000395722 NAP1L4Q99733 375 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms