RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ANKRD23Q86SG2 305 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 PRPF38AQ8NAV1 312 aaKnown RBP17.21■□□□□ 0.35
SCAF11-204ENST00000395454 CCDC148Q8NFR7 591 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 PIBF1Q8WXW3 757 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 ASCC2Q9H1I8 757 aaPredicted RBP17.21■□□□□ 0.35
SCAF11-204ENST00000395454 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 PCDHA4Q9UN74 947 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 STXBP3O00186 592 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 OSBPP22059 807 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 SYKP43405 635 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 TYW1BQ6NUM6 668 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 BTNL9Q6UXG8 535 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 HOMER1Q86YM7 354 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 IFNL1Q8IU54 200 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 ADGRF4Q8IZF3 695 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 CBX8Q9HC52 389 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 KIAA1468Q9P260 1216 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 PPP1R9AQ9ULJ8 1098 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 PRR12Q9ULL5 1215 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 hCG_1984214I3L0E3 225 aa17.2■□□□□ 0.34
SCAF11-204ENST00000395454 PLA2G6O60733 806 aa17.2■□□□□ 0.34
SCAF11-204ENST00000395454 CYP2C8P10632 490 aa17.2■□□□□ 0.34
SCAF11-204ENST00000395454 NLRP5P59047 1200 aa17.2■□□□□ 0.34
SCAF11-204ENST00000395454 ZNF713Q8N859 430 aaPredicted RBP17.2■□□□□ 0.34
SCAF11-204ENST00000395454 TRIM44Q96DX7 344 aaPredicted RBP17.2■□□□□ 0.34
SCAF11-204ENST00000395454 CLIC6Q96NY7 704 aa17.2■□□□□ 0.34
SCAF11-204ENST00000395454 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
SCAF11-204ENST00000395454 PARP14Q460N5 1801 aa17.2■□□□□ 0.34
SCAF11-204ENST00000395454 TM4SF4P48230 202 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 SNAP25P60880 206 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 BLIDQ8IZY5 108 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
SCAF11-204ENST00000395454 FERMT2Q96AC1 680 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 SDF4Q9BRK5 362 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 ANO10Q9NW15 660 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 USP25Q9UHP3 1055 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 SLC45A1Q9Y2W3 748 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 RLFQ13129 1914 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 ESYT2A0FGR8 921 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 SPDYE16A6NNV3 312 aaPredicted RBP17.19■□□□□ 0.34
SCAF11-204ENST00000395454 DSG3P32926 999 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 ZNF165P49910 485 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 ATP2C1P98194 919 aaPredicted RBP17.19■□□□□ 0.34
SCAF11-204ENST00000395454 IQCB1Q15051 598 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 ATG4CQ96DT6 458 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 P2RX7Q99572 595 aaKnown RBP17.19■□□□□ 0.34
SCAF11-204ENST00000395454 ZMYND12Q9H0C1 365 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 JMJD4Q9H9V9 463 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 TUBE1Q9UJT0 475 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 KCNH3Q9ULD8 1083 aa17.19■□□□□ 0.34
SCAF11-204ENST00000395454 MAP2K2P36507 400 aa17.18■□□□□ 0.34
SCAF11-204ENST00000395454 HERVK_113P62684 666 aa17.18■□□□□ 0.34
SCAF11-204ENST00000395454 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
SCAF11-204ENST00000395454 GPKOWQ92917 476 aaPredicted RBP eCLIP17.18■□□□□ 0.34
SCAF11-204ENST00000395454 PARK7Q99497 189 aaKnown RBP17.18■□□□□ 0.34
SCAF11-204ENST00000395454 DNAJC25Q9H1X3 360 aa17.18■□□□□ 0.34
SCAF11-204ENST00000395454 CTDP1Q9Y5B0 961 aaPredicted RBP17.18■□□□□ 0.34
SCAF11-204ENST00000395454 VWA5AO00534 786 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 WNT7AO00755 349 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 TAF1CQ15572 869 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-204ENST00000395454 CDC37Q16543 378 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-204ENST00000395454 NOM1Q5C9Z4 860 aaKnown RBP17.17■□□□□ 0.34
SCAF11-204ENST00000395454 REM2Q8IYK8 340 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-204ENST00000395454 CCDC12Q8WUD4 166 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-204ENST00000395454 RRP36Q96EU6 259 aaKnown RBP17.17■□□□□ 0.34
SCAF11-204ENST00000395454 PIGSQ96S52 555 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 BPIFA3Q9BQP9 254 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
SCAF11-204ENST00000395454 MYPNQ86TC9 1320 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 ADAMTS3O15072 1205 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 GRIN1Q05586 938 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 CCDC174Q6PII3 467 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 LUZP1Q86V48 1076 aa17.17■□□□□ 0.34
SCAF11-204ENST00000395454 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
SCAF11-204ENST00000395454 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
SCAF11-204ENST00000395454 AP5Z1O43299 807 aa17.16■□□□□ 0.34
SCAF11-204ENST00000395454 ADCY5O95622 1261 aa17.16■□□□□ 0.34
SCAF11-204ENST00000395454 KRBA2Q6ZNG9 492 aa17.16■□□□□ 0.34
SCAF11-204ENST00000395454 C11orf57Q6ZUT1 292 aaPredicted RBP17.16■□□□□ 0.34
SCAF11-204ENST00000395454 CPXCR1Q8N123 301 aa17.16■□□□□ 0.34
SCAF11-204ENST00000395454 PAGR1Q9BTK6 254 aa17.16■□□□□ 0.34
SCAF11-204ENST00000395454 RANBP17Q9H2T7 1088 aaKnown RBP17.16■□□□□ 0.34
SCAF11-204ENST00000395454 SLC38A10Q9HBR0 1119 aa17.16■□□□□ 0.34
SCAF11-204ENST00000395454 FAM13BQ9NYF5 915 aa17.16■□□□□ 0.34
SCAF11-204ENST00000395454 ESPNB1AK53 854 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 ZBTB5O15062 677 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 ZBED4O75132 1171 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 QRICH1Q2TAL8 776 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 ARL6IP4Q66PJ3 421 aaKnown RBP17.15■□□□□ 0.34
SCAF11-204ENST00000395454 PIK3AP1Q6ZUJ8 805 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 MTMR8Q96EF0 704 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 PCDHA6Q9UN73 950 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 ADAMTS5Q9UNA0 930 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 PCDHA8Q9Y5H6 950 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 PEX10O60683 326 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 FDX1P10109 184 aa17.15■□□□□ 0.34
SCAF11-204ENST00000395454 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms