RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 FBXO38Q6PIJ6 1188 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 IPO4Q8TEX9 1081 aaKnown RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 PURBQ96QR8 312 aaKnown RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 LZTS2Q9BRK4 669 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 MCM6Q14566 821 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 TERF2Q15554 542 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 ZNF662Q6ZS27 426 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 KRT27Q7Z3Y8 459 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 GLIS3Q8NEA6 775 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 TSPYL1Q9H0U9 437 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 DDX41Q9UJV9 622 aaKnown RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 CYP3A7-CYP3A51PA0A087WV96 503 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 ARHGAP6O43182 974 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 CYP3A7P24462 503 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 FOXR2Q6PJQ5 311 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 KCNMB3Q9NPA1 279 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 KIAA1217Q5T5P2 1943 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 PHACTR2O75167 634 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 GTF2A1P52655 376 aaPredicted RBP11.55□□□□□ -0.56
HIF1A-203ENST00000394997 STK4Q13043 487 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 TTBK2Q6IQ55 1244 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 DHX37Q8IY37 1157 aaKnown RBP11.55□□□□□ -0.56
HIF1A-203ENST00000394997 FHOD1Q9Y613 1164 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 MEIS2O14770 477 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 TSPY3P0CV98 308 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 TSPY8P0CW00 308 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 CALML3P27482 149 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 KIF5BP33176 963 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 LRRC55Q6ZSA7 311 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 TEX11Q8IYF3 940 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 TBC1D22AQ8WUA7 517 aa11.55□□□□□ -0.56
HIF1A-203ENST00000394997 ZNF263O14978 683 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 POLD1P28340 1107 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 HOXD13P35453 343 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 PPP4R3AQ6IN85 833 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 ERO1AQ96HE7 468 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 GMLQ99445 158 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 RIC8AQ9NPQ8 531 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 CTNND2Q9UQB3 1225 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 MYL1P05976 194 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 PLCG1P19174 1290 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 NLRP5P59047 1200 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 ST5P78524 1137 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 CCDC178Q5BJE1 867 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 ADGRF4Q8IZF3 695 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 ZBED3Q96IU2 234 aaPredicted RBP11.54□□□□□ -0.56
HIF1A-203ENST00000394997 ABHD10Q9NUJ1 306 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 BAG3O95817 575 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 ZBTB48P10074 688 aaPredicted RBP11.54□□□□□ -0.56
HIF1A-203ENST00000394997 USP5P45974 858 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 CENPPQ6IPU0 288 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 RASSF4Q9H2L5 321 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 DEF6Q9H4E7 631 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 TDP2O95551 362 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 TFRCP02786 760 aaKnown RBP11.54□□□□□ -0.56
HIF1A-203ENST00000394997 NPR1P16066 1061 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 HERVK_113P62684 666 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 FAM193AP78312 1265 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 IQUBQ8NA54 791 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 ETNPPLQ8TBG4 499 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 SIK3Q9Y2K2 1263 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 MGAMO43451 1857 aa11.54□□□□□ -0.56
HIF1A-203ENST00000394997 KIF2AO00139 706 aaPredicted RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 EPHB6O15197 1021 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 FCER1AP12319 257 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 GTF2IP78347 998 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 ASTE1Q2TB18 679 aaPredicted RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 TMEM51Q9NW97 253 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 SBF1O95248 1867 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 hCG_1984214I3L0E3 225 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 LCA5LO95447 670 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 HNRNPH3P31942 346 aaKnown RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 CASP14P31944 242 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 COPB1P53618 953 aaKnown RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 HNRNPH2P55795 449 aaKnown RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 MCCD1P59942 119 aaPredicted RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 ZNF713Q8N859 430 aaPredicted RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 TBCKQ8TEA7 893 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 AK8Q96MA6 479 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 BAG1Q99933 345 aaPredicted RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
HIF1A-203ENST00000394997 MYMKA6NI61 221 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 H0YHG0 523 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 KLK7P49862 253 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 STX17P56962 302 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 ANKRD40Q6AI12 368 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
HIF1A-203ENST00000394997 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.53□□□□□ -0.561e-7■■■■□ 23.1
HIF1A-203ENST00000394997 A0A1W2PQC6 194 aa11.52□□□□□ -0.56
HIF1A-203ENST00000394997 CBFA2T2O43439 604 aa11.52□□□□□ -0.56
HIF1A-203ENST00000394997 HPS3Q969F9 1004 aa11.52□□□□□ -0.56
HIF1A-203ENST00000394997 ZC3H4Q9UPT8 1303 aaKnown RBP11.52□□□□□ -0.56
HIF1A-203ENST00000394997 SRCAPQ6ZRS2 3230 aa11.52□□□□□ -0.57
HIF1A-203ENST00000394997 SMCO2A6NFE2 343 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms