RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TYW5A2RUC4 315 aaKnown RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 CASQ2O14958 399 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 RNF8O76064 485 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 GSPT1P15170 499 aaKnown RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 VPS41P49754 854 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 C17orf53Q8N3J3 647 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 JPH2Q9BR39 696 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 VCXQ9H320 206 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 PCDHA4Q9UN74 947 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 SLC16A2P36021 539 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 KRT71Q3SY84 523 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 NXNQ6DKJ4 435 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 SLC17A8Q8NDX2 589 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 ZSCAN20P17040 1043 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 GUCY2FP51841 1108 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 SLC7A3Q8WY07 619 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 TRIM56Q9BRZ2 755 aaKnown RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 CLIC4Q9Y696 253 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 TTC36A6NLP5 189 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 IGSF3O75054 1194 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 SAT1P21673 171 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 STAT2P52630 851 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 SEPT6Q14141 434 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 CCDC13Q8IYE1 715 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 TAB3Q8N5C8 712 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 SNX25Q9H3E2 840 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 KMT5AQ9NQR1 393 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 IPO11Q9UI26 975 aaKnown RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 DDX41Q9UJV9 622 aaKnown RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 PDIA3P30101 505 aaKnown RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 NSFP46459 744 aaKnown RBP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 MFAP3P55082 362 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 ZNF827Q17R98 1081 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 NLRP7Q8WX94 980 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 CMA1P23946 247 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 CAPN12Q6ZSI9 719 aa11.36□□□□□ -0.59
COL4A6-203ENST00000394872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL4A6-203ENST00000394872 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 RGS16O15492 202 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 XPAP23025 273 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 ZNF445P59923 1031 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 BFSP1Q12934 665 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 TSTA3Q13630 321 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 ANKRD20A3Q5VUR7 823 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 ADAT2Q7Z6V5 191 aaKnown RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 PI4K2BQ8TCG2 481 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 LMBRD1Q9NUN5 540 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 BUB1BO60566 1050 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 MYCP01106 439 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 IREB2P48200 963 aaKnown RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 PTK2Q05397 1052 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 RAB3IPQ96QF0 476 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 HYOU1Q9Y4L1 999 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 H7C0C1 242 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 THAP12O43422 761 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 GSTA1P08263 222 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 GSTA2P09210 222 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 BMP3P12645 472 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 ATP5OP48047 213 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 SCRN1Q12765 414 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 EXOC3L4Q17RC7 722 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 TTBK2Q6IQ55 1244 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 LMNTD2Q8IXW0 634 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 RYBPQ8N488 228 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-203ENST00000394872 KANSL2Q9H9L4 492 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 NLRP1Q9C000 1473 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 STX2P32856 288 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 MIGA2Q7L4E1 593 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 TRIML1Q8N9V2 468 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 LAD1O00515 517 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 INPP5BP32019 993 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 ARPP19P56211 112 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 PPFIA1Q13136 1202 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 COPRSQ9NQ92 184 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 ANAPC5Q9UJX4 755 aa11.35□□□□□ -0.59
COL4A6-203ENST00000394872 PLEKHG1Q9ULL1 1385 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 GOLGA8CPA6NN73 597 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 WDR46O15213 610 aaKnown RBP11.34□□□□□ -0.59
COL4A6-203ENST00000394872 TROVE2P10155 538 aaKnown RBP eCLIP11.34□□□□□ -0.592e-8■■■■■ 38.3
COL4A6-203ENST00000394872 CTNNA1P35221 906 aaKnown RBP11.34□□□□□ -0.59
COL4A6-203ENST00000394872 RSRC2Q7L4I2 434 aaKnown RBP11.34□□□□□ -0.59
COL4A6-203ENST00000394872 RFX6Q8HWS3 928 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 NT5C1BQ96P26 610 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 MYO5CQ9NQX4 1742 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 KIAA1841Q6NSI8 718 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 EEPD1Q7L9B9 569 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 EXOC8Q8IYI6 725 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 RASGRP4Q8TDF6 673 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 CABS1Q96KC9 395 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms