RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
GPC3-202ENST00000394299 LRWD1Q9UFC0 647 aa16.97■□□□□ 0.31
GPC3-202ENST00000394299 A0A1B0GTH6 734 aa16.97■□□□□ 0.31
GPC3-202ENST00000394299 CCT6AP40227 531 aaKnown RBP16.97■□□□□ 0.31
GPC3-202ENST00000394299 MRPL12P52815 198 aaKnown RBP16.97■□□□□ 0.31
GPC3-202ENST00000394299 TBX2Q13207 712 aaPredicted RBP16.97■□□□□ 0.31
GPC3-202ENST00000394299 DCAF4Q8WV16 495 aa16.97■□□□□ 0.31
GPC3-202ENST00000394299 AK8Q96MA6 479 aa16.97■□□□□ 0.31
GPC3-202ENST00000394299 PSMD1Q99460 953 aa16.97■□□□□ 0.31
GPC3-202ENST00000394299 TMEM39BQ9GZU3 492 aa16.97■□□□□ 0.31
GPC3-202ENST00000394299 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
GPC3-202ENST00000394299 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
GPC3-202ENST00000394299 PAK1Q13153 545 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 GRB10Q13322 594 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 CPLX3Q8WVH0 158 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 HAS1Q92839 578 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 PNMA5Q96PV4 448 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 ATRNL1Q5VV63 1379 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 ECM1Q16610 540 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 CCDC84Q86UT8 332 aaPredicted RBP16.96■□□□□ 0.31
GPC3-202ENST00000394299 OGFOD1Q8N543 542 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
GPC3-202ENST00000394299 PPP1R1BQ9UD71 204 aaPredicted RBP16.96■□□□□ 0.31
GPC3-202ENST00000394299 ADD3Q9UEY8 706 aaKnown RBP16.96■□□□□ 0.31
GPC3-202ENST00000394299 FCER1AP12319 257 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 MCM6Q14566 821 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 CEP135Q66GS9 1140 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 KCNK18Q7Z418 384 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 TC2NQ8N9U0 490 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 VPS16Q9H269 839 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 TMX1Q9H3N1 280 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 BLOC1S4Q9NUP1 217 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 DDX25Q9UHL0 483 aaKnown RBP16.95■□□□□ 0.3
GPC3-202ENST00000394299 RWDD2AQ9UIY3 292 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 CNTNAP1P78357 1384 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 CXCL9Q07325 125 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 ZYXQ15942 572 aaKnown RBP16.95■□□□□ 0.3
GPC3-202ENST00000394299 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 CT47A1Q5JQC4 288 aaPredicted RBP16.95■□□□□ 0.3
GPC3-202ENST00000394299 PPP1R18Q6NYC8 613 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
GPC3-202ENST00000394299 NYAP1Q6ZVC0 841 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 TMEM139Q8IV31 216 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 ADSSL1Q8N142 457 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 TRIM9Q9C026 710 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 RMND1Q9NWS8 449 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 TMOD2Q9NZR1 351 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 SRCAPQ6ZRS2 3230 aa16.95■□□□□ 0.3
GPC3-202ENST00000394299 MEIS2O14770 477 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 STK4Q13043 487 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 KRT31Q15323 416 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 PTPN14Q15678 1187 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 TAB2Q9NYJ8 693 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 BMP3P12645 472 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 ASIC1P78348 528 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 DYMQ7RTS9 669 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 IRF2BP1Q8IU81 584 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 PPP1R13BQ96KQ4 1090 aa16.94■□□□□ 0.3
GPC3-202ENST00000394299 RHOBTB3O94955 611 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.3
GPC3-202ENST00000394299 PDE4DQ08499 809 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 GMCL1P1Q8NEA9 526 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 CALML4Q96GE6 196 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 ZNRF3Q9ULT6 936 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 MARCH6O60337 910 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 EGFRP00533 1210 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 HOXA13P31271 388 aaPredicted RBP16.93■□□□□ 0.3
GPC3-202ENST00000394299 RBL2Q08999 1139 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 SYDE2Q5VT97 1194 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 PPP4R3AQ6IN85 833 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 NIM1KQ8IY84 436 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 GIMAP8Q8ND71 665 aaPredicted RBP16.93■□□□□ 0.3
GPC3-202ENST00000394299 SNX29Q8TEQ0 813 aa16.93■□□□□ 0.3
GPC3-202ENST00000394299 GLIS2Q9BZE0 524 aaPredicted RBP16.93■□□□□ 0.3
GPC3-202ENST00000394299 MYMKA6NI61 221 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 KCNB1Q14721 858 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 TBC1D5Q92609 795 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 GMCL1Q96IK5 515 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 ANO3Q9BYT9 981 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 SMCHD1A6NHR9 2005 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 KCNJ18B7U540 433 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 PBX1P40424 430 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 KCNJ12Q14500 433 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 TMEM266Q2M3C6 531 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 FBXO11Q86XK2 927 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 C7orf25Q9BPX7 421 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 AMNQ9BXJ7 453 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 SLC39A2Q9NP94 309 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 PRR12Q9ULL5 1215 aa16.92■□□□□ 0.3
GPC3-202ENST00000394299 MYH7BA7E2Y1 1941 aa16.91■□□□□ 0.3
GPC3-202ENST00000394299 RNF225M0QZC1 329 aaPredicted RBP16.91■□□□□ 0.3
GPC3-202ENST00000394299 OPLAHO14841 1288 aa16.91■□□□□ 0.3
GPC3-202ENST00000394299 N4BP3O15049 544 aa16.91■□□□□ 0.3
GPC3-202ENST00000394299 NKRFO15226 690 aaKnown RBP eCLIP16.91■□□□□ 0.31e-7■□□□□ 8.8
GPC3-202ENST00000394299 STAT3P40763 770 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms