RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 GREM2Q9H772 168 aa24.15■■□□□ 1.46
CLDND1-202ENST00000394180 RNF225M0QZC1 329 aaPredicted RBP24.14■■□□□ 1.46
CLDND1-202ENST00000394180 RGL2O15211 777 aa24.14■■□□□ 1.46
CLDND1-202ENST00000394180 PDE8AO60658 829 aa24.14■■□□□ 1.46
CLDND1-202ENST00000394180 CSF1RP07333 972 aa24.14■■□□□ 1.46
CLDND1-202ENST00000394180 METAP2P50579 478 aaKnown RBP eCLIP24.14■■□□□ 1.46
CLDND1-202ENST00000394180 DPYDQ12882 1025 aa24.14■■□□□ 1.46
CLDND1-202ENST00000394180 SAFBQ15424 915 aaKnown RBP eCLIP24.14■■□□□ 1.46
CLDND1-202ENST00000394180 IQCDQ96DY2 449 aa24.14■■□□□ 1.46
CLDND1-202ENST00000394180 NUP58Q9BVL2 599 aa24.14■■□□□ 1.46
CLDND1-202ENST00000394180 JADE2Q9NQC1 790 aa24.14■■□□□ 1.46
CLDND1-202ENST00000394180 GPHNQ9NQX3 736 aaPredicted RBP24.14■■□□□ 1.46
CLDND1-202ENST00000394180 CORO1CQ9ULV4 474 aaPredicted RBP24.14■■□□□ 1.46
CLDND1-202ENST00000394180 ANGEL1Q9UNK9 670 aaKnown RBP24.14■■□□□ 1.46
CLDND1-202ENST00000394180 E7EVH7 732 aa24.14■■□□□ 1.45
CLDND1-202ENST00000394180 DNM1LO00429 736 aa24.14■■□□□ 1.45
CLDND1-202ENST00000394180 TRAPPC3O43617 180 aa24.14■■□□□ 1.45
CLDND1-202ENST00000394180 PECAM1P16284 738 aaPredicted RBP24.14■■□□□ 1.45
CLDND1-202ENST00000394180 HAUS3Q68CZ6 603 aa24.14■■□□□ 1.45
CLDND1-202ENST00000394180 LMBR1Q8WVP7 490 aa24.14■■□□□ 1.45
CLDND1-202ENST00000394180 ANKRD27Q96NW4 1050 aa24.14■■□□□ 1.45
CLDND1-202ENST00000394180 TACC1O75410 805 aa24.13■■□□□ 1.45
CLDND1-202ENST00000394180 ATP6V1G2O95670 118 aa24.13■■□□□ 1.45
CLDND1-202ENST00000394180 PDCD2Q16342 344 aaPredicted RBP24.13■■□□□ 1.45
CLDND1-202ENST00000394180 NBPF5PQ86XG9 351 aaPredicted RBP24.13■■□□□ 1.45
CLDND1-202ENST00000394180 APLFQ8IW19 511 aaPredicted RBP24.13■■□□□ 1.45
CLDND1-202ENST00000394180 PSMD1Q99460 953 aa24.13■■□□□ 1.45
CLDND1-202ENST00000394180 PYM1Q9BRP8 204 aaKnown RBP24.13■■□□□ 1.45
CLDND1-202ENST00000394180 HAUS2Q9NVX0 235 aa24.13■■□□□ 1.45
CLDND1-202ENST00000394180 GOLGB1Q14789 3259 aaKnown RBP24.12■■□□□ 1.45
CLDND1-202ENST00000394180 ERICH2A1L162 156 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 CHGBP05060 677 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 HYOU1Q9Y4L1 999 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 IARSP41252 1262 aaKnown RBP24.12■■□□□ 1.45
CLDND1-202ENST00000394180 KIF5AQ12840 1032 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 BIRC3Q13489 604 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 CCDC57Q2TAC2 916 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 CACNA2D3Q8IZS8 1091 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 SH2D3CQ8N5H7 860 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 MICAL1Q8TDZ2 1067 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 SPDL1Q96EA4 605 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 SPAG5Q96R06 1193 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 NOD2Q9HC29 1040 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 TSKSQ9UJT2 592 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 PNPLA7Q6ZV29 1317 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 NID2Q14112 1375 aa24.12■■□□□ 1.45
CLDND1-202ENST00000394180 NEFHP12036 1026 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 HMGB2P26583 209 aaKnown RBP24.11■■□□□ 1.45
CLDND1-202ENST00000394180 PAFAH1B1P43034 410 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 WDR59Q6PJI9 974 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 CPSF2Q9P2I0 782 aaKnown RBP24.11■■□□□ 1.45
CLDND1-202ENST00000394180 C15orf41Q9Y2V0 281 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 ABCC12Q96J65 1359 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 A0A0G2JLW4 131 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 TTC26A0AVF1 554 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 CFAP73A6NFT4 308 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 TOB1P50616 345 aaPredicted RBP24.11■■□□□ 1.45
CLDND1-202ENST00000394180 ELF3P78545 371 aaPredicted RBP24.11■■□□□ 1.45
CLDND1-202ENST00000394180 SEMA3FQ13275 785 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 NTRK3Q16288 839 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 C3orf67Q6ZVT6 689 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 PAGE5Q96GU1 130 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 OSBPL9Q96SU4 736 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 TMBIM4Q9HC24 238 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 TRPC6Q9Y210 931 aa24.11■■□□□ 1.45
CLDND1-202ENST00000394180 MYH3P11055 1940 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 KCNJ18B7U540 433 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 H7C1D1 291 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 ZNF185O15231 689 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 BMP15O95972 392 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 KRT14P02533 472 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 ITGA6P23229 1130 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 SEC24CP53992 1094 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 STX17P56962 302 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 KCNJ12Q14500 433 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 CNKSR2Q8WXI2 1034 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 CCT6BQ92526 530 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 CCDC43Q96MW1 224 aaKnown RBP24.1■■□□□ 1.45
CLDND1-202ENST00000394180 SEC31BQ9NQW1 1179 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 AHCYL1O43865 530 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 USO1O60763 962 aaKnown RBP24.1■■□□□ 1.45
CLDND1-202ENST00000394180 MMP1P03956 469 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 CCT6AP40227 531 aaKnown RBP24.1■■□□□ 1.45
CLDND1-202ENST00000394180 IFIT5Q13325 482 aaKnown RBP24.1■■□□□ 1.45
CLDND1-202ENST00000394180 SLC15A2Q16348 729 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 LRRC24Q50LG9 513 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 KLHL10Q6JEL2 608 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 C8orf74Q6P047 294 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 MB21D1Q8N884 522 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 HDAC7Q8WUI4 952 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 SEC16BQ96JE7 1060 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 TMEM87BQ96K49 555 aa24.1■■□□□ 1.45
CLDND1-202ENST00000394180 PUS3Q9BZE2 481 aaKnown RBP24.1■■□□□ 1.45
CLDND1-202ENST00000394180 GOLGA6L10A6NI86 522 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 LGALS16A8MUM7 142 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 PPIP5K2O43314 1243 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 FESP07332 822 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 LMNB2Q03252 620 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 MKRN4PQ13434 485 aaPredicted RBP24.09■■□□□ 1.45
CLDND1-202ENST00000394180 MSL1Q68DK7 614 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms