RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 NHEJ1Q9H9Q4 299 aaPredicted RBP16.66■□□□□ 0.26
PTGFRN-201ENST00000393203 PCDHB6Q9Y5E3 794 aa16.66■□□□□ 0.26
PTGFRN-201ENST00000393203 EFCAB13Q8IY85 973 aa16.66■□□□□ 0.26
PTGFRN-201ENST00000393203 PABPC4Q13310 644 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTGFRN-201ENST00000393203 RASIP1Q5U651 963 aa16.66■□□□□ 0.26
PTGFRN-201ENST00000393203 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTGFRN-201ENST00000393203 RCOR1Q9UKL0 485 aa16.66■□□□□ 0.26
PTGFRN-201ENST00000393203 SRGAP2O75044 1071 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 STAM2O75886 525 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 TRIP13Q15645 432 aaPredicted RBP16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 TMOD4Q9NZQ9 345 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 CLIC2O15247 247 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 DYNLL1P63167 89 aaKnown RBP16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 GSPT2Q8IYD1 628 aaKnown RBP16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 PUS7LQ9H0K6 701 aaKnown RBP16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 MYOM2P54296 1465 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 SLC12A2P55011 1212 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 AZI2Q9H6S1 392 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 MAD1L1Q9Y6D9 718 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 CTNND1O60716 968 aaKnown RBP16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 CHRNDQ07001 517 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 XKR9Q5GH70 373 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 OTUD6AQ7L8S5 288 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 P2RX5Q93086 422 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 PASKQ96RG2 1323 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 USP27XA6NNY8 438 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 TMEM232C9JQI7 657 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 BFSP1Q12934 665 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 MAP7Q14244 749 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 ARMCX5Q6P1M9 558 aa16.65■□□□□ 0.26
PTGFRN-201ENST00000393203 SUN1O94901 812 aa16.64■□□□□ 0.26
PTGFRN-201ENST00000393203 NR2F2P24468 414 aa16.64■□□□□ 0.26
PTGFRN-201ENST00000393203 EIF4A3P38919 411 aaKnown RBP16.64■□□□□ 0.26
PTGFRN-201ENST00000393203 DEPTORQ8TB45 409 aa16.64■□□□□ 0.26
PTGFRN-201ENST00000393203 SCYL1Q96KG9 808 aa16.64■□□□□ 0.26
PTGFRN-201ENST00000393203 NOVA2Q9UNW9 492 aaKnown RBP16.64■□□□□ 0.26
PTGFRN-201ENST00000393203 ABCC2Q92887 1545 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 SMIM24O75264 130 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 DHX9Q08211 1270 aaKnown RBP16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 DCLK2Q8N568 766 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 FOXP1Q9H334 677 aaPredicted RBP16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 C1orf112Q9NSG2 853 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 SYNJ2BP-COX16A0A087WUM0 186 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 ATP8B1O43520 1251 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 LIG4P49917 911 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 YWHAGP61981 247 aaKnown RBP eCLIP16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 TMED2Q15363 201 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 SCYL3Q8IZE3 742 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 DNAJC17Q9NVM6 304 aaKnown RBP16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 COX16Q9P0S2 106 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 CASP1P29466 404 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 RPS8P62241 208 aaKnown RBP16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 DDAH1O94760 285 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 PHKG2P15735 406 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 MYL7Q01449 175 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 METTL13Q8N6R0 699 aa16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 ZBTB38Q8NAP3 1195 aaPredicted RBP16.64■□□□□ 0.25
PTGFRN-201ENST00000393203 MEIS1O00470 390 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 ZNF658Q5TYW1 1059 aaPredicted RBP16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 ZBED4O75132 1171 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 SATB1Q01826 763 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 POLA2Q14181 598 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 PPP2R5AQ15172 486 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 TERF2Q15554 542 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 THOC1Q96FV9 657 aaKnown RBP16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 MMS19Q96T76 1030 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 TRIM4Q9C037 500 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 TMOD1P28289 359 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 BTDP43251 543 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 YARSP54577 528 aaKnown RBP16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 ANKFY1Q9P2R3 1169 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 INTUQ9ULD6 942 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 MAGED2Q9UNF1 606 aaPredicted RBP16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 DAAM1Q9Y4D1 1078 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 SGK1O00141 431 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 NDUFA10O95299 355 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 NLRX1Q86UT6 975 aa16.63■□□□□ 0.25
PTGFRN-201ENST00000393203 CCDC151A5D8V7 595 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 GFPT2O94808 682 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 MMP1P03956 469 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 ALAS1P13196 640 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 RPS6KA2Q15349 733 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 TCP11X2Q5H9J9 407 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 PCIF1Q9H4Z3 704 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 TYW1Q9NV66 732 aaKnown RBP16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 WDR91A4D1P6 747 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 DKC1O60832 514 aaKnown RBP eCLIP16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 APBA1Q02410 837 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 SMYD2Q9NRG4 433 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 NFU1Q9UMS0 254 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 PCDHA13Q9Y5I0 950 aa16.62■□□□□ 0.25
PTGFRN-201ENST00000393203 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms