RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TSPYL2Q9H2G4 693 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-201ENST00000393077 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 TAF1DQ9H5J8 278 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-201ENST00000393077 HYOU1Q9Y4L1 999 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 KDRP35968 1356 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 PTPRMP28827 1452 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 IGF2BP3O00425 579 aaKnown RBP eCLIP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 MAP3K7O43318 606 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ALDH1L1O75891 902 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 TFRCP02786 760 aaKnown RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 NQO1P15559 274 aaKnown RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 AFMP43652 599 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 CYLC2Q14093 348 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 INAQ16352 499 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ANO1Q5XXA6 986 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 NUGGCQ68CJ6 796 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 HS2ST1Q7LGA3 356 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 VPS37DQ86XT2 251 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 KIF2BQ8N4N8 673 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 CASP10Q92851 521 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 SPATA17Q96L03 361 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 NDEL1Q9GZM8 345 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 PFDN4Q9NQP4 134 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 BTG4Q9NY30 223 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 SUCLA2Q9P2R7 463 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 SATB2Q9UPW6 733 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 PA2G4Q9UQ80 394 aaKnown RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 WDR37Q9Y2I8 494 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 R3HDM2Q9Y2K5 976 aaKnown RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 P4HA2O15460 535 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 TMOD1P28289 359 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 GSTT1P30711 240 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 MSH2P43246 934 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ELOA2Q8IYF1 753 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 TC2NQ8N9U0 490 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 MGARPQ8TDB4 240 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 RPS6KC1Q96S38 1066 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 PREBQ9HCU5 417 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ANKIB1Q9P2G1 1089 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 SMAPO00193 183 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 RGS16O15492 202 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 GHRP10912 638 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ALOX15P16050 662 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 PCYT1AP49585 367 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ZBED6P86452 979 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 FKBP4Q02790 459 aaKnown RBP eCLIP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ADCY1Q08828 1119 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 XRCC4Q13426 336 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 BIRC3Q13489 604 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 P3H1Q32P28 736 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 TTLL7Q6ZT98 887 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 TRPM8Q7Z2W7 1104 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 VPS52Q8N1B4 723 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 LSG1Q9H089 658 aaKnown RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ETNK1Q9HBU6 452 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.35□□□□□ -1.079e-7■■■■□ 22.5
VTI1A-201ENST00000393077 PDP2Q9P2J9 529 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 KCNH3Q9ULD8 1083 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 PIK3C2BO00750 1634 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 TMEM110-MUSTN1A8MSY1 372 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 IL2RBP14784 551 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ATP8B2P98198 1209 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ZBTB16Q05516 673 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ZNF790Q6PG37 636 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 KSR2Q6VAB6 950 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 CCDC110Q8TBZ0 833 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 SMCR8Q8TEV9 937 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ZFAND2BQ8WV99 257 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ACSBG1Q96GR2 724 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 LLPHQ9BRT6 129 aaKnown RBP8.35□□□□□ -1.07
VTI1A-201ENST00000393077 ZWILCHQ9H900 591 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 TXLNGQ9NUQ3 528 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 CEP126Q9P2H0 1117 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 GGT7Q9UJ14 662 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 PCDHA5Q9Y5H7 936 aa8.35□□□□□ -1.07
VTI1A-201ENST00000393077 VWDEQ8N2E2 1590 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 SETBP1Q9Y6X0 1596 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 ARHGEF10O15013 1369 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 QRICH2Q9H0J4 1663 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 SLC27A2O14975 620 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 PRC1O43663 620 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 MMEP08473 750 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 CMA1P23946 247 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 TTC39AQ5SRH9 613 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 ZMYM1Q5SVZ6 1142 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 FNBP4Q8N3X1 1017 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 CATSPER2Q96P56 530 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 SH3GLB1Q9Y371 365 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 ARHGEF40Q8TER5 1519 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 UBN2Q6ZU65 1347 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 IGSF1Q8N6C5 1336 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 UBAP1LF5GYI3 381 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 NVLO15381 856 aaKnown RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 PDE5AO76074 875 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 GSTA1P08263 222 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 CD151P48509 253 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms