RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 DSCC1Q9BVC3 393 aa19.46■□□□□ 0.71
PTPRK-208ENST00000392449 HIP1O00291 1037 aa19.45■□□□□ 0.7
PTPRK-208ENST00000392449 PSMC6P62333 389 aa19.45■□□□□ 0.7
PTPRK-208ENST00000392449 RNF207Q6ZRF8 634 aa19.45■□□□□ 0.7
PTPRK-208ENST00000392449 DGKHQ86XP1 1220 aa19.45■□□□□ 0.7
PTPRK-208ENST00000392449 ENAHQ8N8S7 591 aaPredicted RBP19.45■□□□□ 0.7
PTPRK-208ENST00000392449 PPP1R12CQ9BZL4 782 aa19.45■□□□□ 0.7
PTPRK-208ENST00000392449 AP5M1Q9H0R1 490 aa19.45■□□□□ 0.7
PTPRK-208ENST00000392449 ZSWIM5Q9P217 1185 aa19.45■□□□□ 0.7
PTPRK-208ENST00000392449 GRIN2DO15399 1336 aa19.45■□□□□ 0.7
PTPRK-208ENST00000392449 TIMP1P01033 207 aa19.44■□□□□ 0.7
PTPRK-208ENST00000392449 RPS6P62753 249 aaKnown RBP19.44■□□□□ 0.7
PTPRK-208ENST00000392449 IMMTQ16891 758 aaKnown RBP19.44■□□□□ 0.7
PTPRK-208ENST00000392449 ZNF697Q5TEC3 545 aa19.44■□□□□ 0.7
PTPRK-208ENST00000392449 IQSEC1Q6DN90 963 aa19.44■□□□□ 0.7
PTPRK-208ENST00000392449 FAM109BQ6ICB4 259 aaPredicted RBP19.44■□□□□ 0.7
PTPRK-208ENST00000392449 IQCA1Q86XH1 822 aa19.44■□□□□ 0.7
PTPRK-208ENST00000392449 ZSCAN10Q96SZ4 725 aaPredicted RBP19.44■□□□□ 0.7
PTPRK-208ENST00000392449 KAT14Q9H8E8 782 aa19.44■□□□□ 0.7
PTPRK-208ENST00000392449 VTA1Q9NP79 307 aa19.44■□□□□ 0.7
PTPRK-208ENST00000392449 TNKSO95271 1327 aa19.44■□□□□ 0.7
PTPRK-208ENST00000392449 MROH7Q68CQ1 1323 aa19.44■□□□□ 0.7
PTPRK-208ENST00000392449 CDC37Q16543 378 aaPredicted RBP19.43■□□□□ 0.7
PTPRK-208ENST00000392449 GPATCH4Q5T3I0 446 aaKnown RBP19.43■□□□□ 0.7
PTPRK-208ENST00000392449 TTC22Q5TAA0 569 aa19.43■□□□□ 0.7
PTPRK-208ENST00000392449 ADD3Q9UEY8 706 aaKnown RBP19.43■□□□□ 0.7
PTPRK-208ENST00000392449 WDR19Q8NEZ3 1342 aa19.43■□□□□ 0.7
PTPRK-208ENST00000392449 CSF2RAP15509 400 aa19.42■□□□□ 0.7
PTPRK-208ENST00000392449 C16orf59Q7L2K0 433 aa19.42■□□□□ 0.7
PTPRK-208ENST00000392449 TBC1D5Q92609 795 aa19.42■□□□□ 0.7
PTPRK-208ENST00000392449 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.42■□□□□ 0.72e-6■□□□□ 8.4
PTPRK-208ENST00000392449 WDR11Q9BZH6 1224 aa19.42■□□□□ 0.7
PTPRK-208ENST00000392449 TTYH1Q9H313 450 aaPredicted RBP19.42■□□□□ 0.7
PTPRK-208ENST00000392449 UMODL1Q5DID0 1318 aa19.42■□□□□ 0.7
PTPRK-208ENST00000392449 MYH6P13533 1939 aa19.42■□□□□ 0.7
PTPRK-208ENST00000392449 CD4P01730 458 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 ACRP10323 421 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 CYP2C18P33260 490 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 ITGA7Q13683 1181 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 DUSP28Q4G0W2 176 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 MFSD5Q6N075 450 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 ADGRF4Q8IZF3 695 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 SLC43A3Q8NBI5 491 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 PPP1R13LQ8WUF5 828 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 ANKS1AQ92625 1134 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 TRPV6Q9H1D0 765 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 SMAD3P84022 425 aaKnown RBP19.41■□□□□ 0.7
PTPRK-208ENST00000392449 CYB5R4Q7L1T6 521 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 COPS5Q92905 334 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 SEMA6BQ9H3T3 888 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 CTNNA3Q9UI47 895 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 TAF6LQ9Y6J9 622 aa19.41■□□□□ 0.7
PTPRK-208ENST00000392449 TLR3O15455 904 aaKnown RBP19.4■□□□□ 0.7
PTPRK-208ENST00000392449 PTH1RQ03431 593 aa19.4■□□□□ 0.7
PTPRK-208ENST00000392449 PDE4DQ08499 809 aa19.4■□□□□ 0.7
PTPRK-208ENST00000392449 STAG2Q8N3U4 1231 aa19.4■□□□□ 0.7
PTPRK-208ENST00000392449 PRUNE2Q8WUY3 3088 aa19.4■□□□□ 0.7
PTPRK-208ENST00000392449 CDX2Q99626 313 aaPredicted RBP19.4■□□□□ 0.7
PTPRK-208ENST00000392449 VAT1LQ9HCJ6 419 aa19.4■□□□□ 0.7
PTPRK-208ENST00000392449 COL20A1Q9P218 1284 aa19.4■□□□□ 0.7
PTPRK-208ENST00000392449 Q9Y3F1 56 aa19.4■□□□□ 0.7
PTPRK-208ENST00000392449 RBM47A0AV96 593 aaKnown RBP19.39■□□□□ 0.69
PTPRK-208ENST00000392449 DHX16O60231 1041 aaKnown RBP19.39■□□□□ 0.69
PTPRK-208ENST00000392449 B4GALT4O60513 344 aa19.39■□□□□ 0.69
PTPRK-208ENST00000392449 EDNRBP24530 442 aa19.39■□□□□ 0.69
PTPRK-208ENST00000392449 QRICH1Q2TAL8 776 aa19.39■□□□□ 0.69
PTPRK-208ENST00000392449 ASPRV1Q53RT3 343 aa19.39■□□□□ 0.69
PTPRK-208ENST00000392449 TMEM240Q5SV17 173 aa19.39■□□□□ 0.69
PTPRK-208ENST00000392449 OR6J1Q8NGC5 347 aa19.39■□□□□ 0.69
PTPRK-208ENST00000392449 UBAC1Q9BSL1 405 aa19.39■□□□□ 0.69
PTPRK-208ENST00000392449 KRT23Q9C075 422 aa19.39■□□□□ 0.69
PTPRK-208ENST00000392449 ZEB2O60315 1214 aa19.38■□□□□ 0.69
PTPRK-208ENST00000392449 CABYRO75952 493 aa19.38■□□□□ 0.69
PTPRK-208ENST00000392449 ARIH2O95376 493 aa19.38■□□□□ 0.69
PTPRK-208ENST00000392449 MYL3P08590 195 aa19.38■□□□□ 0.69
PTPRK-208ENST00000392449 PARP1P09874 1014 aaKnown RBP19.38■□□□□ 0.69
PTPRK-208ENST00000392449 CCDC178Q5BJE1 867 aa19.38■□□□□ 0.69
PTPRK-208ENST00000392449 MYLIPQ8WY64 445 aa19.38■□□□□ 0.69
PTPRK-208ENST00000392449 HIPK3Q9H422 1215 aa19.38■□□□□ 0.69
PTPRK-208ENST00000392449 JMJD4Q9H9V9 463 aa19.38■□□□□ 0.69
PTPRK-208ENST00000392449 GRXCR1A8MXD5 290 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 CHMLP26374 656 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 CCL23P55773 120 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 PURAQ00577 322 aaKnown RBP19.37■□□□□ 0.69
PTPRK-208ENST00000392449 PPIGQ13427 754 aaKnown RBP eCLIP19.37■□□□□ 0.694e-11■□□□□ 8.6
PTPRK-208ENST00000392449 SEC23AQ15436 765 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 IFIT1BQ5T764 474 aaKnown RBP19.37■□□□□ 0.69
PTPRK-208ENST00000392449 ZNF365Q70YC5 407 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 TMEM199Q8N511 208 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 DNERQ8NFT8 737 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 TAAR1Q96RJ0 339 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 CNNM2Q9H8M5 875 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 SENP2Q9HC62 589 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 PNMA2Q9UL42 364 aa19.37■□□□□ 0.69
PTPRK-208ENST00000392449 ABCB11O95342 1321 aa19.36■□□□□ 0.69
PTPRK-208ENST00000392449 LOC102724159A0A0B4J2E5 919 aa19.36■□□□□ 0.69
PTPRK-208ENST00000392449 CYP21A2P08686 494 aa19.36■□□□□ 0.69
PTPRK-208ENST00000392449 PPP2R5BQ15173 497 aa19.36■□□□□ 0.69
PTPRK-208ENST00000392449 PWP2Q15269 919 aaKnown RBP19.36■□□□□ 0.69
PTPRK-208ENST00000392449 SYTL5Q8TDW5 730 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms