RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ZNF579Q8NAF0 562 aaKnown RBP22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 TNFRSF25Q93038 417 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 COA7Q96BR5 231 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 JMJD4Q9H9V9 463 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 INTS13Q9NVM9 706 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 DACH1Q9UI36 760 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 DNAI1Q9UI46 699 aa22.44■■□□□ 1.18
CSNK1D-203ENST00000392334 DCAF8L1A6NGE4 600 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 USP17L10C9JJH3 530 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 POTEIP0CG38 1075 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 POTEJP0CG39 1038 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 SARSP49591 514 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 RILPL1Q5EBL4 403 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 TRIML1Q8N9V2 468 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 MLKLQ8NB16 471 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 FBXO2Q9UK22 296 aaPredicted RBP22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 TMEM232C9JQI7 657 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 ADM5C9JUS6 153 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 TBC1D12O60347 775 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 NDUFB10O96000 172 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 ZNF18P17022 549 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 GPATCH4Q5T3I0 446 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 ZNF771Q7L3S4 317 aaPredicted RBP22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 BLIDQ8IZY5 108 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 LRRN4CLQ8ND94 238 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 ENOX1Q8TC92 643 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 DCPSQ96C86 337 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 SH3GLB2Q9NR46 395 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 MAN1B1Q9UKM7 699 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 PCDHA4Q9UN74 947 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 WDR90Q96KV7 1748 aa22.43■■□□□ 1.18
CSNK1D-203ENST00000392334 IQCA1LA6NCM1 817 aa22.42■■□□□ 1.18
CSNK1D-203ENST00000392334 CAP2P40123 477 aa22.42■■□□□ 1.18
CSNK1D-203ENST00000392334 SNAP25P60880 206 aa22.42■■□□□ 1.18
CSNK1D-203ENST00000392334 MAP3K10Q02779 954 aa22.42■■□□□ 1.18
CSNK1D-203ENST00000392334 POSTNQ15063 836 aa22.42■■□□□ 1.18
CSNK1D-203ENST00000392334 GLIS2Q9BZE0 524 aaPredicted RBP22.42■■□□□ 1.18
CSNK1D-203ENST00000392334 TPM1P09493 284 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 SMARCA1P28370 1054 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 ZNF526Q8TF50 670 aaPredicted RBP22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 PITPNM2Q9BZ72 1349 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 SMCO2A6NFE2 343 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 STX10O60499 249 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 TADA3O75528 432 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 CALML3P27482 149 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 CLCN6P51797 869 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 IKQ13123 557 aaPredicted RBP22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 MORC3Q14149 939 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 ZNF174Q15697 407 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 KIAA1755Q5JYT7 1200 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 RRAGCQ9HB90 399 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 PPP2R2CQ9Y2T4 447 aa22.41■■□□□ 1.18
CSNK1D-203ENST00000392334 VWA3AA6NCI4 1184 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 PHF20L1A8MW92 1017 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 ARHGAP29Q52LW3 1261 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 CT47A1Q5JQC4 288 aaPredicted RBP22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 SPECC1Q5M775 1068 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 TAF3Q5VWG9 929 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 KANK3Q6NY19 840 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 KRT26Q7Z3Y9 468 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 SULF1Q8IWU6 871 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 CCDC148Q8NFR7 591 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 EFCAB8A8MWE9 144 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 PPP1R11O60927 126 aaPredicted RBP22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 GRIN1Q05586 938 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 DCAF4Q8WV16 495 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 UBXN4Q92575 508 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 ARGLU1Q9NWB6 273 aaPredicted RBP22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 PCDHA6Q9UN73 950 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 PCDHA8Q9Y5H6 950 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 FHOD1Q9Y613 1164 aa22.4■■□□□ 1.18
CSNK1D-203ENST00000392334 FANCGO15287 622 aa22.39■■□□□ 1.17
CSNK1D-203ENST00000392334 FOXN1O15353 648 aa22.39■■□□□ 1.17
CSNK1D-203ENST00000392334 PRKG1Q13976 671 aa22.39■■□□□ 1.17
CSNK1D-203ENST00000392334 GMCL1P1Q8NEA9 526 aa22.39■■□□□ 1.17
CSNK1D-203ENST00000392334 ARHGEF10LQ9HCE6 1279 aa22.39■■□□□ 1.17
CSNK1D-203ENST00000392334 SRPRBQ9Y5M8 271 aaKnown RBP22.39■■□□□ 1.17
CSNK1D-203ENST00000392334 SSC5DA1L4H1 1573 aa22.39■■□□□ 1.17
CSNK1D-203ENST00000392334 ZRANB2O95218 330 aaKnown RBP eCLIP22.38■■□□□ 1.177e-6■■■□□ 18
CSNK1D-203ENST00000392334 SPECC1LQ69YQ0 1117 aa22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 SPATA20Q8TB22 786 aa22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 SMARCE1Q969G3 411 aa22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 BAG1Q99933 345 aaPredicted RBP22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 CEP131Q9UPN4 1083 aa22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 TRIM75PA6NK02 468 aa22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 SAMD1Q6SPF0 538 aaPredicted RBP22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 TC2NQ8N9U0 490 aa22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 MNS1Q8NEH6 495 aa22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 ZMYND12Q9H0C1 365 aa22.38■■□□□ 1.17
CSNK1D-203ENST00000392334 PNMA6FA0A0J9YX94 578 aa22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 M0R2N6 131 aa22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 ATP8B1O43520 1251 aa22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 BMP3P12645 472 aa22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 ERCC5P28715 1186 aaPredicted RBP22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 PNMA8AQ86V59 439 aaPredicted RBP22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 ZC3H15Q8WU90 426 aaKnown RBP22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 BIN2Q9UBW5 565 aaPredicted RBP22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 SERTAD1Q9UHV2 236 aa22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 NFE2L3Q9Y4A8 694 aa22.37■■□□□ 1.17
CSNK1D-203ENST00000392334 PPP2R3BQ9Y5P8 575 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms