RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ZNF575Q86XF7 245 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 RELL1Q8IUW5 271 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 TXNDC5Q8NBS9 432 aaKnown RBP3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 PTCHD1Q96NR3 888 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 FCRL3Q96P31 734 aaPredicted RBP3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 C11orf84Q9BUA3 381 aaPredicted RBP3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 DSCC1Q9BVC3 393 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 WDR26Q9H7D7 661 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 CYP2C8P10632 490 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 NME1P15531 152 aaKnown RBP3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 L1CAMP32004 1257 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 TGFB2P61812 414 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 FHL2Q14192 279 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 SMN1Q16637 294 aaKnown RBP3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 CWF19L2Q2TBE0 894 aaKnown RBP3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 SPDYAQ5MJ70 313 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 CWF19L1Q69YN2 538 aaKnown RBP3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 STK32CQ86UX6 486 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 C7orf61Q8IZ16 206 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 RSRP1Q9BUV0 290 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 DEF6Q9H4E7 631 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 EHMT1Q9H9B1 1298 aa3.12□□□□□ -1.91
RNU6-239P-201ENST00000390990 NPEPPSL1A6NEC2 478 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 C9IYK1 514 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 NPIPB8E9PQR5 432 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 DDX3XO00571 662 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 IFNGR1P15260 489 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 ZNF445P59923 1031 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 CLCQ05315 142 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 TRIM26Q12899 539 aaPredicted RBP3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 SLC9A5Q14940 896 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 PRR31Q5SQ13 230 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 IGFL4Q6B9Z1 124 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 FBXL19Q6PCT2 694 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 FAM26EQ8N5C1 309 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 KYQ8NBH2 561 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 IGDCC4Q8TDY8 1250 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 BRF1Q92994 677 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 PEX11GQ96HA9 241 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 SLC9A7Q96T83 725 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 PTPN18Q99952 460 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 LRRC3Q9BY71 257 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 PARP2Q9UGN5 583 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 SIT1Q9Y3P8 196 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 RWDD3Q9Y3V2 267 aa3.11□□□□□ -1.91
RNU6-239P-201ENST00000390990 FAM86C2PA6NEL3 165 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 TNFRSF10CO14798 259 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 GREM1O60565 184 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 TBC1D8O95759 1140 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 NOP2P46087 812 aaKnown RBP3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 CRKP46108 304 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 DAB2P98082 770 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 PDE4CQ08493 712 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 SURF1Q15526 300 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 CIR1Q86X95 450 aaPredicted RBP3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 LZTR1Q8N653 840 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 NETO2Q8NC67 525 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 CHFRQ96EP1 664 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 LCORQ96JN0 433 aaPredicted RBP3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 FAM161BQ96MY7 647 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 ZNF341Q9BYN7 854 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 TNFRSF18Q9Y5U5 241 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 ROBO2Q9HCK4 1378 aa3.1□□□□□ -1.91
RNU6-239P-201ENST00000390990 PATE3B3GLJ2 98 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 ZBTB7AO95365 584 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 BRD1O95696 1058 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 CD3EP07766 207 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 SELENOPP49908 381 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 INHBEP58166 350 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 PSMD2Q13200 908 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 NOL9Q5SY16 702 aaKnown RBP3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 DCAF15Q66K64 600 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 CABP7Q86V35 215 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 CCDC144CPQ8IYA2 1237 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 FIBCD1Q8N539 461 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 MBD6Q96DN6 1003 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 MTA3Q9BTC8 594 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 COPRSQ9NQ92 184 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 KCNQ5Q9NR82 932 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 KBTBD4Q9NVX7 518 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 SUCOQ9UBS9 1254 aaKnown RBP3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 NUDT5Q9UKK9 219 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 TESMINQ9Y4I5 508 aa3.09□□□□□ -1.91
RNU6-239P-201ENST00000390990 C9orf118A6NHY6 69 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 MUSKO15146 869 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 EPHB4P54760 987 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 ITGA1P56199 1179 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 PWP1Q13610 501 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 ANKRD39Q53RE8 183 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 EAPPQ56P03 285 aaPredicted RBP3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 AXDND1Q5T1B0 1012 aaPredicted RBP3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 TDRD10Q5VZ19 366 aaKnown RBP3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 CD300LDQ6UXZ3 194 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 GK5Q6ZS86 529 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 TTLL6Q8N841 843 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 RGS22Q8NE09 1264 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 Q8TCH9 128 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 MCMBPQ9BTE3 642 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 IKZF4Q9H2S9 585 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 GP6Q9HCN6 339 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms