RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 CTAGE1Q96RT6 745 aa7.55□□□□□ -1.2
TRAV1-2-201ENST00000390423 DCP1AQ9NPI6 582 aaPredicted RBP7.55□□□□□ -1.2
TRAV1-2-201ENST00000390423 PRKAG3Q9UGI9 489 aa7.55□□□□□ -1.2
TRAV1-2-201ENST00000390423 CACNA1HO95180 2353 aa7.55□□□□□ -1.2
TRAV1-2-201ENST00000390423 PTPRZ1P23471 2315 aaPredicted RBP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 SCN10AQ9Y5Y9 1956 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 H0Y858 1186 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 PITPNM1O00562 1244 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 ATP2A1O14983 1001 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 ZEB2O60315 1214 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 NDUFB10O96000 172 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 MYL3P08590 195 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 SUPT20HL2P0C7V6 817 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 CDK8P49336 464 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 NBPF20Q3BBV1 942 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 SLFNL1Q499Z3 407 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 C20orf194Q5TEA3 1177 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 CERS3Q8IU89 383 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 RETREG2Q8NC44 543 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 BANK1Q8NDB2 785 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 ATOH1Q92858 354 aaPredicted RBP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 KIFC2Q96AC6 838 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 RAD9AQ99638 391 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 SEZ6LQ9BYH1 1024 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 UPF3BQ9BZI7 483 aaKnown RBP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 CCDC8Q9H0W5 538 aaPredicted RBP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 CHMP4BQ9H444 224 aaKnown RBP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 GOPCQ9HD26 462 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 GPR108Q9NPR9 543 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 A1CFQ9NQ94 594 aaKnown RBP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 TLR9Q9NR96 1032 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 CLDND1Q9NY35 253 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 SWAP70Q9UH65 585 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 EXOC6BQ9Y2D4 811 aa7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 NOP58Q9Y2X3 529 aaKnown RBP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 GREB1LQ9C091 1923 aaPredicted RBP7.54□□□□□ -1.2
TRAV1-2-201ENST00000390423 TRIP12Q14669 1992 aaPredicted RBP7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 MED19A0JLT2 244 aaPredicted RBP7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 NBNO60934 754 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 HMMRO75330 724 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 PDE6AP16499 860 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 SMAD2Q15796 467 aaKnown RBP7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 ERMP1Q7Z2K6 904 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 RPAINQ86UA6 219 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 ERC1Q8IUD2 1116 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 SUGP1Q8IWZ8 645 aaKnown RBP7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 RPAP2Q8IXW5 612 aaPredicted RBP7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 FBXL6Q8N531 539 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 DHX38Q92620 1227 aaKnown RBP7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 CRNKL1Q9BZJ0 848 aaKnown RBP7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 ARMT1Q9H993 441 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 KANSL2Q9H9L4 492 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 SLC38A10Q9HBR0 1119 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 ZBTB40Q9NUA8 1239 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 CACNA1BQ00975 2339 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 ZFHX4Q86UP3 3567 aa7.53□□□□□ -1.2
TRAV1-2-201ENST00000390423 MYO7AQ13402 2215 aa7.52□□□□□ -1.2
TRAV1-2-201ENST00000390423 DMDP11532 3685 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 PRR23AA6NEV1 266 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 F5H6K3 240 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 MBTPS2O43462 519 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 IGSF3O75054 1194 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 ZBED4O75132 1171 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 TBX10O75333 385 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 CHGBP05060 677 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 GTF2F1P35269 517 aaKnown RBP eCLIP7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 RRP1P56182 461 aaKnown RBP7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 CHMP4BP1P59074 171 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 KLRC3Q07444 240 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 EPC2Q52LR7 807 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 TIGD5Q53EQ6 642 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 HSP90AB4PQ58FF6 505 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 IQSEC1Q6DN90 963 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 KIAA1211Q6ZU35 1233 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 LRRC8DQ7L1W4 858 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 PRPF38AQ8NAV1 312 aaKnown RBP7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 CHST13Q8NET6 341 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 EAF2Q96CJ1 260 aaPredicted RBP7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 CCDC17Q96LX7 622 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 CRBNQ96SW2 442 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 PRRX2Q99811 253 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 MTG1Q9BT17 334 aaPredicted RBP7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 FSD1Q9BTV5 496 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 FAM50BQ9Y247 325 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 Q9Y3F1 56 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 ZNF532Q9HCE3 1301 aa7.52□□□□□ -1.21
TRAV1-2-201ENST00000390423 VPS13AQ96RL7 3174 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 TCRBV5S4A2TA0A5A2 114 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 ASB14A6NK59 587 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 PROB1E7EW31 1015 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 STXBP3O00186 592 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 LINC01565O15544 149 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 CSPG5O95196 566 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 PDGFBP01127 241 aaPredicted RBP7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 ID4P47928 161 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 SNAP25P60880 206 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 ZXDAP98168 799 aa7.51□□□□□ -1.21
TRAV1-2-201ENST00000390423 HYAL1Q12794 435 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms