RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 ZFATQ9P243 1243 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 GGT7Q9UJ14 662 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 JAG2Q9Y219 1238 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 MYH7P12883 1935 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 GOLGB1Q14789 3259 aaKnown RBP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 A0A1W2PP55 124 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 FZD9O00144 591 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 RAD17O75943 681 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 MAP4K4O95819 1239 aaPredicted RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 TUBB4AP04350 444 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 PTMAP06454 111 aaKnown RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 CDK11BP21127 795 aaKnown RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 EIF6P56537 245 aaKnown RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 TNIP1Q15025 636 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 SF3A1Q15459 793 aaKnown RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 TAF1CQ15572 869 aaPredicted RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 MFSD14BQ5SR56 506 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 STRIP1Q5VSL9 837 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 SPTY2D1Q68D10 685 aaPredicted RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 TTLL5Q6EMB2 1281 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 ERMP1Q7Z2K6 904 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 KRT25Q7Z3Z0 450 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 C3orf58Q8NDZ4 430 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 RILPL2Q969X0 211 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 EDC3Q96F86 508 aaKnown RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 GMLQ99445 158 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 GAS2L1Q99501 681 aaPredicted RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 TRIM56Q9BRZ2 755 aaKnown RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 FSD1Q9BTV5 496 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 PIH1D3Q9NQM4 214 aaKnown RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 FAM8A1Q9UBU6 413 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 ABCF2Q9UG63 623 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 SALL4Q9UJQ4 1053 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 DYRK1BQ9Y463 629 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 PAXBP1Q9Y5B6 917 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 SALL1Q9NSC2 1324 aa8.68□□□□□ -1.02
TRBV28-201ENST00000390400 MYO5AQ9Y4I1 1855 aaKnown RBP8.68□□□□□ -1.02
TRBV28-201ENST00000390400 FAM187AA6NFU0 413 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 MMP20O60882 483 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 GADD45BO75293 160 aaPredicted RBP8.67□□□□□ -1.02
TRBV28-201ENST00000390400 IDH1O75874 414 aaKnown RBP8.67□□□□□ -1.02
TRBV28-201ENST00000390400 CAVIN2O95810 425 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 F11P03951 625 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 SDSP20132 328 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 FKBP1AP62942 108 aaKnown RBP8.67□□□□□ -1.02
TRBV28-201ENST00000390400 CXCL9Q07325 125 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 CTC1Q2NKJ3 1217 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 LRRFIP1Q32MZ4 808 aaKnown RBP8.67□□□□□ -1.02
TRBV28-201ENST00000390400 DACT2Q5SW24 774 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 CIAPIN1Q6FI81 312 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 CTR9Q6PD62 1173 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 KBTBD3Q8NAB2 608 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 DOCK2Q92608 1830 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 GSX2Q9BZM3 304 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRBV28-201ENST00000390400 SUV39H2Q9H5I1 410 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 KCNQ5Q9NR82 932 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 RAI14Q9P0K7 980 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 LRP2BPQ9P2M1 347 aa8.67□□□□□ -1.02
TRBV28-201ENST00000390400 ZNF646O15015 1829 aaPredicted RBP8.66□□□□□ -1.02
TRBV28-201ENST00000390400 MAST2Q6P0Q8 1798 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 RFX7Q2KHR2 1363 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 MAST3O60307 1309 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 MYO3BQ8WXR4 1341 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 ZNF541Q9H0D2 1346 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 PSMD14O00487 310 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 GIPC1O14908 333 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 EFSO43281 561 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 VIL1P09327 827 aaKnown RBP8.66□□□□□ -1.02
TRBV28-201ENST00000390400 DNAJA1P31689 397 aaKnown RBP8.66□□□□□ -1.02
TRBV28-201ENST00000390400 MAP3K12Q12852 859 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 CUL4AQ13619 759 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 DNTTIP2Q5QJE6 756 aaKnown RBP8.66□□□□□ -1.02
TRBV28-201ENST00000390400 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 ZSCAN25Q6NSZ9 544 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 DPH6Q7L8W6 267 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 DZIP1Q86YF9 867 aaKnown RBP8.66□□□□□ -1.02
TRBV28-201ENST00000390400 ZNF654Q8IZM8 581 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 CERS5Q8N5B7 392 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 CNTNAP3BQ96NU0 1288 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 MXD3Q9BW11 206 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 CNTNAP3Q9BZ76 1288 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 YY1AP1Q9H869 796 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 CUEDC1Q9NWM3 386 aaPredicted RBP8.66□□□□□ -1.02
TRBV28-201ENST00000390400 SUGT1Q9Y2Z0 365 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 ATP6V1DQ9Y5K8 247 aa8.66□□□□□ -1.02
TRBV28-201ENST00000390400 MYH2Q9UKX2 1941 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 POTECB2RU33 542 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 KIF2AO00139 706 aaPredicted RBP8.65□□□□□ -1.02
TRBV28-201ENST00000390400 HIP1O00291 1037 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 NEMFO60524 1076 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 TRPA1O75762 1119 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 ZFYP08048 801 aaPredicted RBP8.65□□□□□ -1.02
TRBV28-201ENST00000390400 PDE6AP16499 860 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 CES1P23141 567 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 PRDX5P30044 214 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 GSTO1P78417 241 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 KIAA0319Q5VV43 1072 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 MCTP1Q6DN14 999 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms