RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 RHOXF2BP0C7M4 288 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 TXKP42681 527 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 CHMP4BP1P59074 171 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 GSTO1P78417 241 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 PDE4DQ08499 809 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 STK4Q13043 487 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 CC2D1AQ6P1N0 951 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 TBCKQ8TEA7 893 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 GOLGA1Q92805 767 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 RHOXF2Q9BQY4 288 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 MXD3Q9BW11 206 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 NAA15Q9BXJ9 866 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 ENC1O14682 589 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 MAGEA9P43362 315 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 USP21Q9UK80 565 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 SNED1Q8TER0 1413 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 LRRC10BA6NIK2 292 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 PHACTR2O75167 634 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 TBC1D8O95759 1140 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 OR52Z1P0C646 297 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 ARHGAP25P42331 645 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 SPAG1Q07617 926 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 ANKS1AQ92625 1134 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 PCMTD1Q96MG8 357 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 REXO2Q9Y3B8 237 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-201ENST00000389212 LDHCP07864 332 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 PPP4CP60510 307 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 NONOQ15233 471 aaKnown RBP eCLIP13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 CYP26C1Q6V0L0 522 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 TMTC1Q8IUR5 882 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 CSGALNACT2Q8N6G5 542 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 SLC39A2Q9NP94 309 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 TCP11L1Q9NUJ3 509 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 ITIH6Q6UXX5 1313 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 H7C1D1 291 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 KIF1CO43896 1103 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 ATP2B2Q01814 1243 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 NCAPH2Q6IBW4 605 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 DYMQ7RTS9 669 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 GPR161Q8N6U8 529 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 GOLGA5Q8TBA6 731 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 PYM1Q9BRP8 204 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 KBTBD4Q9NVX7 518 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 VPS18Q9P253 973 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 HDAC6Q9UBN7 1215 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 SEC63Q9UGP8 760 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 BTAF1O14981 1849 aa13.06□□□□□ -0.32
RAPGEF3-201ENST00000389212 FRMD3A2A2Y4 597 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 CTAGE9A4FU28 777 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 PSMA7O14818 248 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 RAD21O60216 631 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 GTF2IP78347 998 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 NAIF1Q69YI7 327 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 ANKRD40Q6AI12 368 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 RRP36Q96EU6 259 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 PNKPQ96T60 521 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 DUSP9Q99956 384 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 IRAK4Q9NWZ3 460 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 MAGEC2Q9UBF1 373 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 CDC23Q9UJX2 597 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 TDP2O95551 362 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 RHBDL3P58872 404 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 SMC1AQ14683 1233 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 MUM1L1Q5H9M0 696 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 C16orf86Q6ZW13 317 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 TRIM9Q9C026 710 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 EXOC1Q9NV70 894 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 EPN1Q9Y6I3 576 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 ROBO3Q96MS0 1386 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 POTEMA6NI47 508 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 LGALS16A8MUM7 142 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 STIM1Q13586 685 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 GIMAP8Q8ND71 665 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 CCSER1Q9C0I3 900 aa13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-201ENST00000389212 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 SRGAP2O75044 1071 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 RHOBTB3O94955 611 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 NDUFA10O95299 355 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 CEP120Q8N960 986 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 DAGLBQ8NCG7 672 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 NEDD1Q8NHV4 660 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 JPH2Q9BR39 696 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 TUBGCP2Q9BSJ2 902 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 MMTAG2Q9BU76 263 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 C6orf50Q9HD87 102 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms