RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 BRD3Q15059 726 aa13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 PLA2G4DQ86XP0 818 aa13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 KCTD2Q14681 263 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 EDC3Q96F86 508 aaKnown RBP13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 CLTCQ00610 1675 aaKnown RBP13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 BRD1O95696 1058 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 LOC102724428A0A0B4J2F2 783 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 SIK1P57059 783 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 NME8Q8N427 588 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 RILPQ96NA2 401 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 POLR2BP30876 1174 aaKnown RBP13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 CCNA1P78396 465 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 TTC36A6NLP5 189 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 PTGDRQ13258 359 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 ODR4Q5SWX8 454 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 RAB3IPQ96QF0 476 aaPredicted RBP13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 CLNS1AP54105 237 aaKnown RBP13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 TMC4Q7Z404 712 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 AOC3Q16853 763 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 ANKRD20A3Q5VUR7 823 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 EAF2Q96CJ1 260 aaPredicted RBP13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 GDAP1L1Q96MZ0 367 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 CCDC88CQ9P219 2028 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 TPCN1Q9ULQ1 816 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 PCDHA7Q9UN72 937 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 S100BP04271 92 aaPredicted RBP13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 BPIFB4P59827 614 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 CCDC68Q9H2F9 335 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 SLC39A2Q9NP94 309 aa13.45□□□□□ -0.26
KCNQ3-201ENST00000388996 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 GJA10Q969M2 543 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 AMNQ9BXJ7 453 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 ABL1P00519 1130 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 PHKA1P46020 1223 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 PPARDQ03181 441 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 CCDC38Q502W7 563 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 RDH13Q8NBN7 331 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 RNF40O75150 1001 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 SKA2Q8WVK7 121 aaPredicted RBP13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 PCDHB4Q9Y5E5 795 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 KIF3CO14782 793 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 SPICE1Q8N0Z3 855 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 NBPF3Q9H094 633 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 ZSWIM6Q9HCJ5 1215 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 GCNT4Q9P109 453 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 FGAP02671 866 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 TROVE2P10155 538 aaKnown RBP eCLIP13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 RASSF2P50749 326 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 CCDC127Q96BQ5 260 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 RPS6KC1Q96S38 1066 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 DISC1Q9NRI5 854 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 A6NJR5 290 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 WDR46O15213 610 aaKnown RBP13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 GOLGA8HP0CJ92 632 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 GAP43P17677 238 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 SEPT9Q9UHD8 586 aaPredicted RBP13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 ASCC3Q8N3C0 2202 aaKnown RBP13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 TRAPPC10P48553 1259 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 GABPB1Q06547 395 aaPredicted RBP13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 A0A1W2PQ27 194 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 A0A1W2PQ64 194 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 A0A1W2PQD8 194 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 SRGAP2BP0DMP2 458 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 ADAM9Q13443 819 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 PTPREP23469 700 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 DIXDC1Q155Q3 683 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
KCNQ3-201ENST00000388996 PLEKHA4Q9H4M7 779 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 TYW1Q9NV66 732 aaKnown RBP13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 SYNJ2BP-COX16A0A087WUM0 186 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 EIF3CLB5ME19 914 aaKnown RBP13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 EIF3CQ99613 913 aaKnown RBP13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 COX16Q9P0S2 106 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 KCNQ3O43525 872 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 VPS41P49754 854 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 RABEP2Q9H5N1 569 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 GREM2Q9H772 168 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 DPP9Q86TI2 863 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 ATP8B3O60423 1300 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 WDR17Q8IZU2 1322 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 NRBP2Q9NSY0 501 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 GOLGA8CPA6NN73 597 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 COPRSQ9NQ92 184 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 CYP4A11Q02928 519 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 BBOF1Q8ND07 529 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 TSC1Q92574 1164 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 CEP120Q8N960 986 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 HOMER3Q9NSC5 361 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 MTMR6Q9Y217 621 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms