RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 USP17L20D6RJB6 530 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 ZBED4O75132 1171 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 DPEP1P16444 411 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 MAP2K1Q02750 393 aaPredicted RBP20.9■□□□□ 0.94
CSPG5-202ENST00000383738 USP17L24Q0WX57 530 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 CASP8Q14790 479 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 USP17L6PQ6QN14 398 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 CCDC121Q6ZUS5 278 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 CSGALNACT2Q8N6G5 542 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 STAG1Q8WVM7 1258 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 MYCBPQ99417 103 aaPredicted RBP20.9■□□□□ 0.94
CSPG5-202ENST00000383738 KIF13AQ9H1H9 1805 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 MROH7-TTC4A0A0A0MT08 1334 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 FAM205CA6NFA0 338 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 LUC7LQ9NQ29 371 aaKnown RBP20.9■□□□□ 0.94
CSPG5-202ENST00000383738 CDC23Q9UJX2 597 aa20.9■□□□□ 0.94
CSPG5-202ENST00000383738 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.9■□□□□ 0.94
CSPG5-202ENST00000383738 ICE2Q659A1 982 aa20.89■□□□□ 0.94
CSPG5-202ENST00000383738 DCPSQ96C86 337 aaKnown RBP20.89■□□□□ 0.94
CSPG5-202ENST00000383738 ATP6V0A2Q9Y487 856 aa20.89■□□□□ 0.94
CSPG5-202ENST00000383738 CNTNAP4Q9C0A0 1308 aa20.89■□□□□ 0.94
CSPG5-202ENST00000383738 GOLGA6L10A0A0M3HER8 536 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 SLC39A14Q15043 492 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 BANK1Q8NDB2 785 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 OPA1O60313 960 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 N4BP1O75113 896 aaKnown RBP20.89■□□□□ 0.93
CSPG5-202ENST00000383738 MMP1P03956 469 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 RTKN2Q8IZC4 609 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 RIN2Q8WYP3 895 aaPredicted RBP20.89■□□□□ 0.93
CSPG5-202ENST00000383738 EXOC4Q96A65 974 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 ZNF341Q9BYN7 854 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 ABCC12Q96J65 1359 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 MEIS1O00470 390 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 CMA1P23946 247 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 COL9A3Q14050 684 aaPredicted RBP20.89■□□□□ 0.93
CSPG5-202ENST00000383738 CPLX4Q7Z7G2 160 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 ADGRA1Q86SQ6 560 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 JPH2Q9BR39 696 aaPredicted RBP20.89■□□□□ 0.93
CSPG5-202ENST00000383738 LZTS2Q9BRK4 669 aa20.89■□□□□ 0.93
CSPG5-202ENST00000383738 CCDC151A5D8V7 595 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 TACC1O75410 805 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 RBL2Q08999 1139 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 KSR1Q8IVT5 923 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 FOXN1O15353 648 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 SRGAP2O75044 1071 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 TBC1D8BQ0IIM8 1120 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 TTBK2Q6IQ55 1244 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 CCDC17Q96LX7 622 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 SLC39A2Q9NP94 309 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 MKRN1Q9UHC7 482 aaKnown RBP20.88■□□□□ 0.93
CSPG5-202ENST00000383738 MYO6Q9UM54 1294 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 ANTXR2P58335 489 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 SARM1Q6SZW1 724 aa20.88■□□□□ 0.93
CSPG5-202ENST00000383738 GAS7O60861 476 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 BMP3P12645 472 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 CXCR5P32302 372 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 VAV2P52735 878 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 SLURP2P0DP57 97 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 CALRP27797 417 aaKnown RBP20.87■□□□□ 0.93
CSPG5-202ENST00000383738 RAPGEF1Q13905 1077 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 HS2ST1Q7LGA3 356 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 MLKLQ8NB16 471 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 TRIM31Q9BZY9 425 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 PHLPP2Q6ZVD8 1323 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 STX10O60499 249 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 NEFHP12036 1026 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 FBXO33Q7Z6M2 555 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 ANKRD35Q8N283 1001 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 KCNQ5Q9NR82 932 aa20.87■□□□□ 0.93
CSPG5-202ENST00000383738 USP17L10C9JJH3 530 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 E2F5Q15329 346 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 PNMA8AQ86V59 439 aaPredicted RBP20.86■□□□□ 0.93
CSPG5-202ENST00000383738 NCAPG2Q86XI2 1143 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 TADA3O75528 432 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 EEF2P13639 858 aaKnown RBP20.86■□□□□ 0.93
CSPG5-202ENST00000383738 AMNQ9BXJ7 453 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 SAR1BQ9Y6B6 198 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 ARHGEF35A5YM69 484 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 OR52Z1P0C646 297 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 JAKMIP2Q96AA8 810 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 FERMT2Q96AC1 680 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 DDX25Q9UHL0 483 aaKnown RBP20.86■□□□□ 0.93
CSPG5-202ENST00000383738 TMEM260Q9NX78 707 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 FHOD1Q9Y613 1164 aa20.86■□□□□ 0.93
CSPG5-202ENST00000383738 RPSAP08865 295 aaKnown RBP20.85■□□□□ 0.93
CSPG5-202ENST00000383738 NFIAQ12857 509 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 MYCT1Q8N699 235 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 LRRC27Q9C0I9 530 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 PABPC4Q13310 644 aaKnown RBP eCLIP20.85■□□□□ 0.93
CSPG5-202ENST00000383738 RNF181Q9P0P0 153 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 DNM3Q9UQ16 869 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 IVNS1ABPQ9Y6Y0 642 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 EZRP15311 586 aaKnown RBP20.85■□□□□ 0.93
CSPG5-202ENST00000383738 KRT83P78385 493 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 SPP2Q13103 211 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 LRRC41Q15345 812 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 CYP26C1Q6V0L0 522 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 SAMD7Q7Z3H4 446 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 VSTM4Q8IW00 320 aa20.85■□□□□ 0.93
CSPG5-202ENST00000383738 KLHL7Q8IXQ5 586 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms