RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TMBIM4Q9HC24 238 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 WDR35Q9P2L0 1181 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 LRWD1Q9UFC0 647 aa16.57■□□□□ 0.24
VLDLR-202ENST00000382099 CNOT8Q9UFF9 292 aaKnown RBP16.57■□□□□ 0.24
VLDLR-202ENST00000382099 ANO9A1A5B4 782 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 GNAT3A8MTJ3 354 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 SLC17A8Q8NDX2 589 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 DDX17Q92841 729 aaKnown RBP16.56■□□□□ 0.24
VLDLR-202ENST00000382099 CHMP6Q96FZ7 201 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 MDM2Q00987 491 aaPredicted RBP16.56■□□□□ 0.24
VLDLR-202ENST00000382099 CCDC178Q5BJE1 867 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 FBF1Q8TES7 1133 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 KRT12Q99456 494 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 MAF1Q9H063 256 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 ECT2Q9H8V3 914 aa16.56■□□□□ 0.24
VLDLR-202ENST00000382099 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 PFDN1O60925 122 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 ADAM9Q13443 819 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 PTPAQ15257 358 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 KRT71Q3SY84 523 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 ANO7Q6IWH7 933 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 KLHL7Q8IXQ5 586 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 TEX9Q8N6V9 391 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 GALNT8Q9NY28 637 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 AGAP1Q9UPQ3 857 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 UBN2Q6ZU65 1347 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 TMEM2Q9UHN6 1383 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 CCDC38Q502W7 563 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 PHKBQ93100 1093 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 TSPYL2Q9H2G4 693 aaPredicted RBP16.55■□□□□ 0.24
VLDLR-202ENST00000382099 CAPN6Q9Y6Q1 641 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 RGPD8O14715 1765 aaPredicted RBP16.55■□□□□ 0.24
VLDLR-202ENST00000382099 USO1O60763 962 aaKnown RBP16.55■□□□□ 0.24
VLDLR-202ENST00000382099 DRD4P21917 467 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 MRPS35P82673 323 aaKnown RBP16.55■□□□□ 0.24
VLDLR-202ENST00000382099 EXOSC10Q01780 885 aaKnown RBP16.55■□□□□ 0.24
VLDLR-202ENST00000382099 TRIM14Q14142 442 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 RRAGBQ5VZM2 374 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 SEPT14Q6ZU15 432 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 MIPOL1Q8TD10 442 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
VLDLR-202ENST00000382099 SWAP70Q9UH65 585 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 HYOU1Q9Y4L1 999 aa16.55■□□□□ 0.24
VLDLR-202ENST00000382099 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 RBM47A0AV96 593 aaKnown RBP16.54■□□□□ 0.24
VLDLR-202ENST00000382099 ZNF189O75820 626 aaPredicted RBP16.54■□□□□ 0.24
VLDLR-202ENST00000382099 TRIM21P19474 475 aaKnown RBP16.54■□□□□ 0.24
VLDLR-202ENST00000382099 DYNC1I2Q13409 638 aaKnown RBP16.54■□□□□ 0.24
VLDLR-202ENST00000382099 RUFY4Q6ZNE9 571 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 USP49Q70CQ1 688 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 TRPM8Q7Z2W7 1104 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 TRIML1Q8N9V2 468 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 PREBQ9HCU5 417 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 ABCF3Q9NUQ8 709 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 PIK3C2AO00443 1686 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 SMIM23A6NLE4 172 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 DCDC2CA8MYV0 355 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 UBOX5O94941 541 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
VLDLR-202ENST00000382099 ZNF268Q14587 947 aaPredicted RBP16.54■□□□□ 0.24
VLDLR-202ENST00000382099 IFI16Q16666 785 aaKnown RBP16.54■□□□□ 0.24
VLDLR-202ENST00000382099 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 SLC12A6Q9UHW9 1150 aa16.54■□□□□ 0.24
VLDLR-202ENST00000382099 IFNAR2P48551 515 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 FAM114A1Q8IWE2 563 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 ZFAND2BQ8WV99 257 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 UBAC1Q9BSL1 405 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 VCXQ9H320 206 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 MYH8P13535 1937 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 DIP2BQ9P265 1576 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
VLDLR-202ENST00000382099 RAD23BP54727 409 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 MYBPC3Q14896 1274 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 EEF2KMTQ96G04 330 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 OCEL1Q9H607 264 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 USH1CQ9Y6N9 552 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 CHD2O14647 1828 aaKnown RBP16.53■□□□□ 0.24
VLDLR-202ENST00000382099 ITIH6Q6UXX5 1313 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 KCNJ18B7U540 433 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
VLDLR-202ENST00000382099 H0Y3Z8 333 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 KRT16P08779 473 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 MYL6BP14649 208 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 TCP1P17987 556 aaKnown RBP16.53■□□□□ 0.24
VLDLR-202ENST00000382099 KLC1Q07866 573 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 KCNJ12Q14500 433 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 AMOTQ4VCS5 1084 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 ELOA2Q8IYF1 753 aaPredicted RBP16.53■□□□□ 0.24
VLDLR-202ENST00000382099 PROCA1Q8NCQ7 364 aaPredicted RBP16.53■□□□□ 0.24
VLDLR-202ENST00000382099 CASKIN2Q8WXE0 1202 aa16.53■□□□□ 0.24
VLDLR-202ENST00000382099 NHEJ1Q9H9Q4 299 aaPredicted RBP16.53■□□□□ 0.24
VLDLR-202ENST00000382099 CRYBG1Q9Y4K1 1723 aa16.52■□□□□ 0.24
VLDLR-202ENST00000382099 POLD1P28340 1107 aa16.52■□□□□ 0.24
VLDLR-202ENST00000382099 STAT6P42226 847 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms