RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 SBNO1A3KN83 1393 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 H3BQF6 201 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 EIF3HO15372 352 aaKnown RBP eCLIP6.27□□□□□ -1.41
RFC1-202ENST00000381897 IFIT1P09914 478 aaKnown RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 TRIM21P19474 475 aaKnown RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 USP14P54578 494 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 MECOMQ03112 1051 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 HSP90AA4PQ58FG1 418 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 RRAGBQ5VZM2 374 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 RAB11FIP4Q86YS3 637 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 LMTK2Q8IWU2 1503 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 TRIM58Q8NG06 486 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 WDR24Q96S15 920 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 ATXN2Q99700 1313 aaKnown RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 A0A0D9SFI3 127 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 E7EVH7 732 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 FOXO3O43524 673 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 SASH3O75995 380 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 IL2P60568 153 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 LINS1Q8NG48 757 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 MAML1Q92585 1016 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 ZNF180Q9UJW8 692 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 SLC12A7Q9Y666 1083 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 ERBB3P21860 1342 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 A8MV72 311 aaPredicted RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 MEFVO15553 781 aaPredicted RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 TAF5LO75529 589 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 MMEP08473 750 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 FDX1P10109 184 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 ATP5JP18859 108 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 PPP1R2P41236 205 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 ATP11AP98196 1134 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 PPM1NQ8N819 430 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 ARMC2Q8NEN0 867 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 PPHLN1Q8NEY8 458 aaKnown RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 CABLES1Q8TDN4 633 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 FBF1Q8TES7 1133 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 RUNDC3BQ96NL0 473 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 PLEKHA4Q9H4M7 779 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 KLC4Q9NSK0 619 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 L1RE1Q9UN81 338 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 VWDEQ8N2E2 1590 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 NEXMIFQ5QGS0 1516 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 B3GALNT1O75752 331 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 STAM2O75886 525 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 TCP1P17987 556 aaKnown RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 CA8P35219 290 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 ARHGAP18Q8N392 663 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 CALML4Q96GE6 196 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 CCDC42Q96M95 316 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 CCDC43Q96MW1 224 aaKnown RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 NACAP1Q9BZK3 213 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 RNF113AO15541 343 aaKnown RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 ZBTB43O43298 467 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 PQBP1O60828 265 aaKnown RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 ATP6V1G1O75348 118 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 CHRM1P11229 460 aaPredicted RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 KRT13P13646 458 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 GUCY2FP51841 1108 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 VSNL1P62760 191 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 GOLGA8DPQ0D2H9 430 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 GKAP1Q5VSY0 366 aaPredicted RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 ANKS3Q6ZW76 656 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 MYO1HQ8N1T3 1032 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 TTC30BQ8N4P2 665 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 ENGASEQ8NFI3 743 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 TBC1D22AQ8WUA7 517 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 SPON2Q9BUD6 331 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 DPH5Q9H2P9 285 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 ADGRG1Q9Y653 693 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 CLIC4Q9Y696 253 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 TLDC2A0PJX2 215 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 ANO9A1A5B4 782 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 MFAP3LO75121 409 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 GBP1P32455 592 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 HPDP32754 393 aaPredicted RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 GGCXP38435 758 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 AARSP49588 968 aaKnown RBP eCLIP6.26□□□□□ -1.418e-6■■■■■ 52.4
RFC1-202ENST00000381897 EIF2B5Q13144 721 aaKnown RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 TRIM65Q6PJ69 517 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 APLFQ8IW19 511 aaPredicted RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 SLF1Q9BQI6 1058 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 MAP3K20Q9NYL2 800 aaKnown RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 C6orf203Q9P0P8 240 aaPredicted RBP6.26□□□□□ -1.41
RFC1-202ENST00000381897 PARP2Q9UGN5 583 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 HPCAL4Q9UM19 191 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 HYOU1Q9Y4L1 999 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 NUB1Q9Y5A7 615 aa6.26□□□□□ -1.41
RFC1-202ENST00000381897 BICDL2A1A5D9 508 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 TRAF5O00463 557 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 AKR1B10O60218 316 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 COBLO75128 1261 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 DDHD2O94830 711 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 ATP1A3P13637 1013 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 EFR3AQ14156 821 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 GLE1Q53GS7 698 aaKnown RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 TTLL7Q6ZT98 887 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 ELOA2Q8IYF1 753 aaPredicted RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 OR8K1Q8NGG5 319 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 PPP1R14BQ96C90 147 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms