RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 KIAA1217Q5T5P2 1943 aa16.6■□□□□ 0.25
SHOX-202ENST00000381575 TIMP1P01033 207 aa16.6■□□□□ 0.25
SHOX-202ENST00000381575 RPS6P62753 249 aaKnown RBP16.6■□□□□ 0.25
SHOX-202ENST00000381575 FAM109BQ6ICB4 259 aaPredicted RBP16.6■□□□□ 0.25
SHOX-202ENST00000381575 RNF207Q6ZRF8 634 aa16.6■□□□□ 0.25
SHOX-202ENST00000381575 ENAHQ8N8S7 591 aaPredicted RBP16.6■□□□□ 0.25
SHOX-202ENST00000381575 MORC4Q8TE76 937 aa16.6■□□□□ 0.25
SHOX-202ENST00000381575 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
SHOX-202ENST00000381575 MROH7Q68CQ1 1323 aa16.6■□□□□ 0.25
SHOX-202ENST00000381575 SCN5AQ14524 2016 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 HIP1O00291 1037 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 ACRP10323 421 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 CYP2C18P33260 490 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 NKX3-2P78367 333 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
SHOX-202ENST00000381575 IQSEC1Q6DN90 963 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 PPP1R13LQ8WUF5 828 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 ZSCAN10Q96SZ4 725 aaPredicted RBP16.59■□□□□ 0.25
SHOX-202ENST00000381575 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.59■□□□□ 0.25
SHOX-202ENST00000381575 TTYH1Q9H313 450 aaPredicted RBP16.59■□□□□ 0.25
SHOX-202ENST00000381575 KAT14Q9H8E8 782 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 ZSWIM5Q9P217 1185 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 ADD3Q9UEY8 706 aaKnown RBP16.59■□□□□ 0.25
SHOX-202ENST00000381575 GRIN2DO15399 1336 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 TNKSO95271 1327 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 UMODL1Q5DID0 1318 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 VCANP13611 3396 aa16.59■□□□□ 0.25
SHOX-202ENST00000381575 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.25
SHOX-202ENST00000381575 SCN10AQ9Y5Y9 1956 aa16.58■□□□□ 0.25
SHOX-202ENST00000381575 CSF2RAP15509 400 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 SMAD3P84022 425 aaKnown RBP16.58■□□□□ 0.24
SHOX-202ENST00000381575 ITGA7Q13683 1181 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.24
SHOX-202ENST00000381575 GPATCH4Q5T3I0 446 aaKnown RBP16.58■□□□□ 0.24
SHOX-202ENST00000381575 TTC22Q5TAA0 569 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 MFSD5Q6N075 450 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 DGKHQ86XP1 1220 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 TBC1D5Q92609 795 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 WDR11Q9BZH6 1224 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 TRPV6Q9H1D0 765 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 CHD7Q9P2D1 2997 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 WDR19Q8NEZ3 1342 aa16.58■□□□□ 0.24
SHOX-202ENST00000381575 TLR3O15455 904 aaKnown RBP16.57■□□□□ 0.24
SHOX-202ENST00000381575 CD4P01730 458 aa16.57■□□□□ 0.24
SHOX-202ENST00000381575 PDE4DQ08499 809 aa16.57■□□□□ 0.24
SHOX-202ENST00000381575 DUSP28Q4G0W2 176 aa16.57■□□□□ 0.24
SHOX-202ENST00000381575 C16orf59Q7L2K0 433 aa16.57■□□□□ 0.24
SHOX-202ENST00000381575 ADGRF4Q8IZF3 695 aa16.57■□□□□ 0.24
SHOX-202ENST00000381575 COPS5Q92905 334 aa16.57■□□□□ 0.24
SHOX-202ENST00000381575 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
SHOX-202ENST00000381575 SEMA6BQ9H3T3 888 aa16.57■□□□□ 0.24
SHOX-202ENST00000381575 VAT1LQ9HCJ6 419 aa16.57■□□□□ 0.24
SHOX-202ENST00000381575 TRIP12Q14669 1992 aaPredicted RBP16.56■□□□□ 0.24
SHOX-202ENST00000381575 DHX16O60231 1041 aaKnown RBP16.56■□□□□ 0.24
SHOX-202ENST00000381575 MYL3P08590 195 aa16.56■□□□□ 0.24
SHOX-202ENST00000381575 CYB5R4Q7L1T6 521 aa16.56■□□□□ 0.24
SHOX-202ENST00000381575 SLC43A3Q8NBI5 491 aa16.56■□□□□ 0.24
SHOX-202ENST00000381575 OR6J1Q8NGC5 347 aa16.56■□□□□ 0.24
SHOX-202ENST00000381575 MYLIPQ8WY64 445 aa16.56■□□□□ 0.24
SHOX-202ENST00000381575 GRXCR1A8MXD5 290 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 ZEB2O60315 1214 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 B4GALT4O60513 344 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 PTH1RQ03431 593 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 PPIGQ13427 754 aaKnown RBP eCLIP16.55■□□□□ 0.24
SHOX-202ENST00000381575 QRICH1Q2TAL8 776 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 TMEM240Q5SV17 173 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 STAG2Q8N3U4 1231 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 UBAC1Q9BSL1 405 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 HIPK3Q9H422 1215 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 COL20A1Q9P218 1284 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 TAF6LQ9Y6J9 622 aa16.55■□□□□ 0.24
SHOX-202ENST00000381575 DLL1O00548 723 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 CABYRO75952 493 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 ARIH2O95376 493 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
SHOX-202ENST00000381575 EDNRBP24530 442 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 CCL23P55773 120 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 PPP2R5BQ15173 497 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 ASPRV1Q53RT3 343 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 CCDC178Q5BJE1 867 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 ZNF365Q70YC5 407 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 ANKS1AQ92625 1134 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 KRT23Q9C075 422 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 Q9Y3F1 56 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 TET1Q8NFU7 2136 aa16.54■□□□□ 0.24
SHOX-202ENST00000381575 RBM47A0AV96 593 aaKnown RBP16.53■□□□□ 0.24
SHOX-202ENST00000381575 DNAJB2P25686 324 aa16.53■□□□□ 0.24
SHOX-202ENST00000381575 IFIT1BQ5T764 474 aaKnown RBP16.53■□□□□ 0.24
SHOX-202ENST00000381575 TMEM199Q8N511 208 aa16.53■□□□□ 0.24
SHOX-202ENST00000381575 TAAR1Q96RJ0 339 aa16.53■□□□□ 0.24
SHOX-202ENST00000381575 NOC4LQ9BVI4 516 aaKnown RBP16.53■□□□□ 0.24
SHOX-202ENST00000381575 CNNM2Q9H8M5 875 aa16.53■□□□□ 0.24
SHOX-202ENST00000381575 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
SHOX-202ENST00000381575 TRMT13Q9NUP7 481 aaKnown RBP16.53■□□□□ 0.24
SHOX-202ENST00000381575 ABCB11O95342 1321 aa16.53■□□□□ 0.24
SHOX-202ENST00000381575 CHMLP26374 656 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 PBX2P40425 430 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 CHMP4BP1P59074 171 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms